Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021755
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha...    94   8e-20
Z69302-10|CAA93267.1|  295|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z47074-3|CAA87376.1|  295|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF008590-1|AAB63299.1|  295|Caenorhabditis elegans paraquat resp...    29   2.5  
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly...    29   3.3  
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly...    29   3.3  
Z81119-1|CAB03331.1|  363|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z70269-2|CAA94224.1|  143|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z82073-1|CAB04923.1|  444|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AC006608-6|AAF39753.1|  308|Caenorhabditis elegans Steroid alpha
           reductase familyprotein 1 protein.
          Length = 308

 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
 Frame = +2

Query: 488 FVHSSLFHGTMPLKNLFRNCAYYWLFALYVAYHVNHPLYTAPC--TTCYYIGLGGFVLCE 661
           F+H    + TMP  NL +NC+YYW FA +VAY VNHPL+T P       Y GL GFV+ E
Sbjct: 147 FIHR-FGNSTMPQFNLVKNCSYYWGFAAFVAYFVNHPLFTPPAFGDLQVYFGLAGFVISE 205

Query: 662 LGNLSIHILLKNLRPA 709
            GNLSIHILL+NLRPA
Sbjct: 206 FGNLSIHILLRNLRPA 221



 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +3

Query: 288 LFLKDLGPQVSWRNVFLAEYAGPLFVYLWVYQRPWILYG--TQTSSPEQVATVAAICWSA 461
           L+++DLGPQ++W+ VF+AEYAGPLFVY   Y RP  +YG     ++      +A   WS 
Sbjct: 77  LYVRDLGPQIAWKTVFMAEYAGPLFVYPLFYLRPTFIYGQAAVNATMHPAVQIAFFAWSF 136

Query: 462 HYAKRLFETLFIHRF 506
           HYAKRLFET FIHRF
Sbjct: 137 HYAKRLFETQFIHRF 151



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = +1

Query: 127 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 249
           ++G  +IK +K++I Q  K  L  +RQAL++E KGK L D+
Sbjct: 23  ISGSETIKAIKKRIAQK-KLKLTEERQALRVEPKGKPLADD 62


>Z69302-10|CAA93267.1|  295|Caenorhabditis elegans Hypothetical
           protein F40F8.7 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +2

Query: 446 NMLVSTLCQKVV*NF----VHSSLFHGTMPLKNLFRNCAYYWLFALYVAYHVNH 595
           N  + T+C+KV   +     H +++H   P+K    NC +    A Y+ +H N+
Sbjct: 159 NGYMCTVCRKVYGRYNSVSYHVTIYHRNPPIKCNVPNCQFTTREARYIHFHKNY 212


>Z47074-3|CAA87376.1|  295|Caenorhabditis elegans Hypothetical
           protein F40F8.7 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +2

Query: 446 NMLVSTLCQKVV*NF----VHSSLFHGTMPLKNLFRNCAYYWLFALYVAYHVNH 595
           N  + T+C+KV   +     H +++H   P+K    NC +    A Y+ +H N+
Sbjct: 159 NGYMCTVCRKVYGRYNSVSYHVTIYHRNPPIKCNVPNCQFTTREARYIHFHKNY 212


>AF008590-1|AAB63299.1|  295|Caenorhabditis elegans paraquat
           responsive protein protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +2

Query: 446 NMLVSTLCQKVV*NF----VHSSLFHGTMPLKNLFRNCAYYWLFALYVAYHVNH 595
           N  + T+C+KV   +     H +++H   P+K    NC +    A Y+ +H N+
Sbjct: 159 NGYMCTVCRKVYGRYNSVSYHVTIYHRNPPIKCNVPNCQFTTREARYIHFHKNY 212


>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
           polyprotein allergen related,post-translationnally
           cleaved, the diverse 14.5 kDa cleavageproducts bind
           lipids and retinol (164.6 kD) protein.
          Length = 1440

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 593 GSHDKPHRGQTTNNMHSF*TSSSMASYHGKAMNEQSFKQPFGI 465
           G+H++ HR +  N++H + T+    S    A   + FK+   +
Sbjct: 20  GNHNRHHRNRRDNDLHDWLTAEQKESLKDIAQGTEEFKKKVAV 62


>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
           polyprotein allergen relatedprotein 1, isoform a
           protein.
          Length = 1440

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 593 GSHDKPHRGQTTNNMHSF*TSSSMASYHGKAMNEQSFKQPFGI 465
           G+H++ HR +  N++H + T+    S    A   + FK+   +
Sbjct: 20  GNHNRHHRNRRDNDLHDWLTAEQKESLKDIAQGTEEFKKKVAV 62


>Z81119-1|CAB03331.1|  363|Caenorhabditis elegans Hypothetical
           protein T10H4.2 protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 207 LTIWV*RF--LHALLDFFFYILYRTFTCNVNLAERFRARYAQNFNLHIV 67
           +TIW   +  + +LL   F+  Y + T  + L +RF  RY   + L+I+
Sbjct: 95  VTIWCSFYAMMLSLLSIHFFYRYTSVTAPILLMKRFSCRYIFKYTLYIL 143


>Z70269-2|CAA94224.1|  143|Caenorhabditis elegans Hypothetical
           protein ZK1086.2 protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +3

Query: 309 PQVSWRNVFLAEYAGPLFVYLWVYQRPWILYGTQTSSPEQVATVAAICWSAHYA-KRLFE 485
           P +  RN  + E A     Y+  Y        T  +    +A   AI  + HY  K++ +
Sbjct: 13  PPIWERNAEMFEDARNFIEYVSTYLAKDFYKLTLYAYTVLLAFFIAIIEARHYDFKQMGD 72

Query: 486 TLFIHRFSMVRCH*RTCSETVHIIGCLPSMWLI 584
           T+FI    ++ C   TCS T   + C  +++L+
Sbjct: 73  TIFILAIFVLFCMGATCSFTFFAMTCRHALFLV 105


>Z82073-1|CAB04923.1|  444|Caenorhabditis elegans Hypothetical
           protein W06D12.2 protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 572 YVAYHVNHPLYTAPCTTCYYIGLGGFVLCELGN 670
           Y  YH++H +         ++G G FVLCE  N
Sbjct: 10  YERYHLHHLVKIGVLIVYSFLGAGLFVLCEAEN 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,732,560
Number of Sequences: 27780
Number of extensions: 375331
Number of successful extensions: 1005
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)