Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021754
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 64  YFSITNYYERSYSLLREWYTRFVNKQFRR 150
           Y+S+ +  E ++  +R W   F  KQ  R
Sbjct: 117 YYSLDDLSEDTFYDIRLWGVSFSKKQILR 145


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 526 GLVQPYAF*KPSISQFLF 579
           G+V PY+F KP   + L+
Sbjct: 25  GIVPPYSFEKPDSQKSLW 42


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 526 GLVQPYAF*KPSISQFLF 579
           G+V PY+F KP   + L+
Sbjct: 25  GIVPPYSFEKPDSQKSLW 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,736
Number of Sequences: 336
Number of extensions: 3210
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)