Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021754
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.7  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    23   7.0  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   7.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 31   FFHINIFMGFYYFSITNYYERSY 99
            FF +NIF+GF   +  N  E+ Y
Sbjct: 1111 FFMVNIFVGFVIVTFQNEGEQEY 1133


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 433 DPTGVGTGLTMFGS 392
           DPTG+ TGL  F S
Sbjct: 201 DPTGISTGLICFTS 214


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 299 RDSCTPVPPPSDLRVHLPTRRWLLTGCI 216
           +DSC        L + LP RRW + G +
Sbjct: 378 KDSCQG-DSGGPLMIQLPNRRWAVVGIV 404


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 165 SGRPPPLRVVHQSCFLDYAACKKPATGWQMDPQVGG 272
           +G PP   + H  CF       +P++G  +  Q  G
Sbjct: 738 NGEPPDWELKHADCFNHCLEVYRPSSGGAVALQSNG 773


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,492
Number of Sequences: 2352
Number of extensions: 13565
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)