Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021754
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021068-2|CAI19782.1|  497|Homo sapiens solute carrier family 1...    31   3.0  
AL021068-1|CAI19781.1|  459|Homo sapiens solute carrier family 1...    31   3.0  
AJ238413-1|CAB50771.1|  497|Homo sapiens THTR-1 protein protein.       31   3.0  
AJ237724-1|CAB50770.1|  497|Homo sapiens THTR-1 protein protein.       31   3.0  
AF272359-1|AAK54468.1|  497|Homo sapiens thiamine transporter 1 ...    31   3.0  
AF160812-1|AAF15129.1|  497|Homo sapiens thiamine transporter 1 ...    31   3.0  
AF153330-1|AAD43534.1|  497|Homo sapiens thiamine carrier 1 prot...    31   3.0  
AF135488-1|AAD45985.1|  497|Homo sapiens high affinity thiamine ...    31   3.0  

>AL021068-2|CAI19782.1|  497|Homo sapiens solute carrier family 19
           (thiamine transporter), member 2 protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AL021068-1|CAI19781.1|  459|Homo sapiens solute carrier family 19
           (thiamine transporter), member 2 protein.
          Length = 459

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AJ238413-1|CAB50771.1|  497|Homo sapiens THTR-1 protein protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AJ237724-1|CAB50770.1|  497|Homo sapiens THTR-1 protein protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AF272359-1|AAK54468.1|  497|Homo sapiens thiamine transporter 1
           protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AF160812-1|AAF15129.1|  497|Homo sapiens thiamine transporter 1
           protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AF153330-1|AAD43534.1|  497|Homo sapiens thiamine carrier 1
           protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


>AF135488-1|AAD45985.1|  497|Homo sapiens high affinity thiamine
           transporter protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 485 NLDSANCLSHSPGRGWYSPMPFKNLRFHNFCST 583
           N+ S  C+S +    W+ PMP K+L FH+  ST
Sbjct: 191 NVISLTCVSVAFAVAWFLPMPQKSLFFHHIPST 223


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,104,832
Number of Sequences: 237096
Number of extensions: 2104998
Number of successful extensions: 4019
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4019
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)