Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021754
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p pro...    29   6.1  
AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p pro...    29   6.1  
AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC...    29   6.1  

>AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -2

Query: 264 LAGPSANPSLASYRLHNLRNMTGGRRVMAAAGLTTRRF--SSKLFVHKTGIPLAQQRV*S 91
           L  P+AN  L S R+H +R   GG   + A  L T  F  +S+    KT I        +
Sbjct: 29  LGRPAANTKLGSGRVHKVRT-RGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASN 87

Query: 90  FVIVRNRKVVKS 55
             +VR + +VK+
Sbjct: 88  NELVRTKTLVKN 99


>AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -2

Query: 264 LAGPSANPSLASYRLHNLRNMTGGRRVMAAAGLTTRRF--SSKLFVHKTGIPLAQQRV*S 91
           L  P+AN  L S R+H +R   GG   + A  L T  F  +S+    KT I        +
Sbjct: 29  LGRPAANTKLGSGRVHKVRT-RGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASN 87

Query: 90  FVIVRNRKVVKS 55
             +VR + +VK+
Sbjct: 88  NELVRTKTLVKN 99


>AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -2

Query: 264 LAGPSANPSLASYRLHNLRNMTGGRRVMAAAGLTTRRF--SSKLFVHKTGIPLAQQRV*S 91
           L  P+AN  L S R+H +R   GG   + A  L T  F  +S+    KT I        +
Sbjct: 29  LGRPAANTKLGSGRVHKVRT-RGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASN 87

Query: 90  FVIVRNRKVVKS 55
             +VR + +VK+
Sbjct: 88  NELVRTKTLVKN 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,088,296
Number of Sequences: 53049
Number of extensions: 631698
Number of successful extensions: 1145
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)