Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021754
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92827-7|CAB07324.1|  368|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z92827-4|CAB07323.1|  722|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z29121-6|CAH19096.1|  405|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z29121-5|CAD54174.2|  403|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z22180-12|CAH19086.1|  405|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z22180-11|CAD54147.2|  403|Caenorhabditis elegans Hypothetical p...    29   3.2  
U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U88312-1|AAB42351.1|  255|Caenorhabditis elegans Hypothetical pr...    29   4.2  

>Z92827-7|CAB07324.1|  368|Caenorhabditis elegans Hypothetical
           protein C29F7.4 protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = +2

Query: 152 NRRVVRPAAAIT--RRPPVMFLRLCSL 226
           +R VV+P+A I+  RRPP+ ++ LC+L
Sbjct: 50  SRSVVQPSADISDLRRPPISYVALCAL 76


>Z92827-4|CAB07323.1|  722|Caenorhabditis elegans Hypothetical
           protein C29F7.5 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = +2

Query: 152 NRRVVRPAAAIT--RRPPVMFLRLCSL 226
           +R VV+P+A I+  RRPP+ ++ LC+L
Sbjct: 404 SRSVVQPSADISDLRRPPISYVALCAL 430


>Z29121-6|CAH19096.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK757.4b protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 48  FYGILLLFYYELLRTIILVVARVVYPFCEQTI*KRTVES 164
           FY +L+LFY   LRT+     +    +C +   K T ES
Sbjct: 63  FYALLILFYTSYLRTVYTKAWKPPQKYCIEGASKATYES 101


>Z29121-5|CAD54174.2|  403|Caenorhabditis elegans Hypothetical
           protein ZK757.4a protein.
          Length = 403

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 48  FYGILLLFYYELLRTIILVVARVVYPFCEQTI*KRTVES 164
           FY +L+LFY   LRT+     +    +C +   K T ES
Sbjct: 61  FYALLILFYTSYLRTVYTKAWKPPQKYCIEGASKATYES 99


>Z22180-12|CAH19086.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK757.4b protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 48  FYGILLLFYYELLRTIILVVARVVYPFCEQTI*KRTVES 164
           FY +L+LFY   LRT+     +    +C +   K T ES
Sbjct: 63  FYALLILFYTSYLRTVYTKAWKPPQKYCIEGASKATYES 101


>Z22180-11|CAD54147.2|  403|Caenorhabditis elegans Hypothetical
           protein ZK757.4a protein.
          Length = 403

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 48  FYGILLLFYYELLRTIILVVARVVYPFCEQTI*KRTVES 164
           FY +L+LFY   LRT+     +    +C +   K T ES
Sbjct: 61  FYALLILFYTSYLRTVYTKAWKPPQKYCIEGASKATYES 99


>U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical
           protein F55D10.1 protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 216 YAACKKPATGWQMDP 260
           +  C KP TGWQ+DP
Sbjct: 156 FGECGKPVTGWQIDP 170


>U88312-1|AAB42351.1|  255|Caenorhabditis elegans Hypothetical
           protein F25F6.1 protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +1

Query: 124 RFVNKQFRREPSSRQAGRRHYASSTSHVS*IMQPVRSQRRVGRWTRKSE 270
           ++V K +   PSS++A   +   S+ H   +  P+R Q++  R+ R  +
Sbjct: 81  KYVEKNYEIPPSSQKATSSNLYYSSVHHLWVQNPIRQQKQSRRFKRADD 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,133
Number of Sequences: 27780
Number of extensions: 303729
Number of successful extensions: 707
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)