BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021754 (700 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 29 0.032 AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 4.9 AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 8.5 >AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 protein. Length = 208 Score = 29.5 bits (63), Expect = 0.032 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = -2 Query: 264 LAGPSANPSLASYRLHNLRNMTGGRRVMAAAGLTTRRFS--SKLFVHKTGIPLAQQRV*S 91 L P+AN L R+H +R GG + A L T FS S+ KT I + Sbjct: 29 LGRPAANTKLGPQRIHTVRT-RGGNKKYRALRLDTGNFSWGSECTTRKTRIIDVVYNASN 87 Query: 90 FVIVRNRKVVKS 55 +VR + +VK+ Sbjct: 88 NELVRTKTLVKN 99 >AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type D2 protein. Length = 456 Score = 22.2 bits (45), Expect = 4.9 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +1 Query: 142 FRREPSSRQAGRRHYASSTSH 204 FR +PS R A R+Y++ + H Sbjct: 421 FRCKPSQRFASGRYYSAYSLH 441 >AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1 protein. Length = 500 Score = 21.4 bits (43), Expect = 8.5 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -3 Query: 287 TPVPPPSDLRVHLPTRRWLL 228 +PVP P L + +P R L+ Sbjct: 444 SPVPSPDPLDLAIPVRETLI 463 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 190,095 Number of Sequences: 438 Number of extensions: 3483 Number of successful extensions: 10 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21439440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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