Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021753
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 5e-31
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 128 3e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 107 1e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 93 1e-19
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 3e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.1
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 2.7
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 2.7
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.7
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 3.6
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 3.6
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.6
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 4.8
SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09) 28 6.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 6.3
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 6.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 6.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.3
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1) 28 6.3
SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 6.3
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 8.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 436 KMTQIMFETFNTPAMYVAIQAVLS 507
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLS 142
Score = 131 bits (317), Expect = 5e-31
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 690 TAE 698
TAE
Sbjct: 204 TAE 206
Score = 120 bits (289), Expect = 1e-27
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 AK 268
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 436 KMTQIMFETFNTPAMYVAIQAVLS 507
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLS 141
Score = 132 bits (319), Expect = 3e-31
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 690 TAE 698
TAE
Sbjct: 203 TAE 205
Score = 117 bits (282), Expect = 8e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 436 KMTQIMFETFNTPAMYVAIQAVLS 507
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLS 141
Score = 132 bits (319), Expect = 3e-31
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 690 TAE 698
TAE
Sbjct: 203 TAE 205
Score = 118 bits (285), Expect = 3e-27
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 436 KMTQIMFETFNTPAMYVAIQAVLS 507
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLS 142
Score = 132 bits (319), Expect = 3e-31
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 690 TAE 698
TAE
Sbjct: 204 TAE 206
Score = 124 bits (300), Expect = 5e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 AK 268
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (443), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 436 KMTQIMFETFNTPAMYVAIQAVLS 507
KMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLS 142
Score = 120 bits (289), Expect = 1e-27
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 AK 268
+K
Sbjct: 61 SK 62
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 2/30 (6%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYE--GYA 593
YASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 144 YASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 633 DLTDYLMKILTERGYSFTTTAE 698
D + + I ERGYSFTTTAE
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAE 179
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 131 bits (317), Expect = 5e-31
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 106 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTT 165
Query: 690 TAE 698
TAE
Sbjct: 166 TAE 168
Score = 118 bits (285), Expect = 3e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 354
AQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 427 NREKMTQIMFETFNTPAMYVAIQAVLS 507
N + M +IMFETFN+PAMYVAIQAVLS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLS 104
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 128 bits (310), Expect = 3e-30
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTT
Sbjct: 22 YASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTT 81
Query: 690 TAE 698
TAE
Sbjct: 82 TAE 84
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 448 IMFETFNTPAMYVAIQAVLS 507
IMFE FN+PA+YVAIQAVLS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLS 20
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 107 bits (256), Expect = 1e-23
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +
Sbjct: 2188 YASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQS 2247
Query: 690 TAE 698
TAE
Sbjct: 2248 TAE 2250
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = +1
Query: 334 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 507
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 208
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 93.5 bits (222), Expect = 1e-19
Identities = 38/63 (60%), Positives = 55/63 (87%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +
Sbjct: 169 YATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHS 228
Query: 690 TAE 698
++E
Sbjct: 229 SSE 231
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 382 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLS
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLS 167
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANR 432
A R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NR
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120
Query: 433 EKMTQIMFETFNTPAMYVAIQAVLS 507
EKM ++MFE + +Y+AIQAVL+
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLT 145
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/63 (60%), Positives = 50/63 (79%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 689
YA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F
Sbjct: 147 YAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNH 206
Query: 690 TAE 698
TA+
Sbjct: 207 TAD 209
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 101 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 253
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGD
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGD 59
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 471
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 472 PAMYVAIQAVLS 507
PA ++ +VL+
Sbjct: 63 PAFFLCKNSVLT 74
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +3
Query: 507 AYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 668
A+A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 208
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 528 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 671
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 510 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSFT 686
YASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG++FT
Sbjct: 773 YASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFT 832
Query: 687 TTA 695
+++
Sbjct: 833 SSS 835
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 77 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 223
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 286 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 399
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 528 TGIVLDSGDGVSHTVPI 578
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 205 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 89
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 435
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 406 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTK 585
A P A + + +NTP I + + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 586 DTHSP 600
P
Sbjct: 946 QPQPP 950
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 349 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 528
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 529 PVSCWTPATVSPTPCPSTKDTHSP 600
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 349 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 528
T E VAPE + E+ L + +T + ET TP VA + + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 529 PVSCWTPATVSPTPCPSTKDTHSP 600
+ TV+P + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +1
Query: 361 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 528
E +APE E P + E+ P+ MT + ET TP VA + + + P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 529 PVSCWTPATVSPTPCPSTKDTHSP 600
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 408 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 500
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +1
Query: 388 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPT 567
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 568 PCPSTKDTHSPTP 606
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 175 VPLDRGKAPPSGRDGRYGTEGLLCRRWAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 348
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 349 TFYN 360
T N
Sbjct: 497 TCPN 500
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYNE 363
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 95 EVAALVVDNGSGMCKAGFAGDDAPRAV 175
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 367 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWT 546
++A + +P + E N K + +K+ Q M +T + + ++ + +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 547 PATVSPTPCPSTKDTHSP-TPSCV 615
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 469 TPAMYVAIQAVLSRT-RPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 609
TPA +RT P+ PP C + V PTP S+K + SP+PS
Sbjct: 315 TPAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 457 ETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKD 588
+ + P + +Q +++ P + P +C TP +SP T+D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 502 LSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 615
+ T VVPP+ P V P+P + + SPTPSC+
Sbjct: 204 IPETPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 502 LSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 609
+ TRP VP +T PTP P T P P+
Sbjct: 929 IQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 355 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPV 522
Y +L V +PV T+ + + N + TQ+M T P Y + V +R PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/88 (25%), Positives = 34/88 (38%)
Frame = +1
Query: 355 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPV 534
Y +L V +PV + + + N + TQ+M T P Y + V +R P V
Sbjct: 545 YTQLMVFTRYNPVRYAQLMVFTRHNPVRYTQLMVFTRYNPVRYAQLM-VFTRHNP-VRYA 602
Query: 535 SCWTPATVSPTPCPSTKDTHSPTPSCVW 618
+ A + T TP CV+
Sbjct: 603 QLFVIARLLQTAVRIAASNEESTPPCVY 630
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTP 570
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 571 CPSTKDTHSP 600
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_51860| Best HMM Match : ShTK (HMM E-Value=1.5e-09)
Length = 197
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 502 LSRTRPVVPPVSCWTPA---TVSPTPCPSTKDTHSPTPSCV 615
LS+++P+VPP P T+ PTP T P P+ V
Sbjct: 105 LSKSKPLVPPTEISGPGPKETLPPTPATLPPTTVPPAPAPV 145
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/74 (27%), Positives = 26/74 (35%)
Frame = +1
Query: 388 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPT 567
P T P P T +T TP + P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 568 PCPSTKDTHSPTPS 609
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +1
Query: 409 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSP-TPCPSTK 585
P P +T+ +T TP ++ P P + T T +P TP P+
Sbjct: 5 PTAPTLTTPTLTKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAP 64
Query: 586 DTHSPTPS 609
+PTP+
Sbjct: 65 TQTTPTPA 72
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +1
Query: 349 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTR 516
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 517 PVVPPVSCWTPATVSP--TPCPST 582
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -2
Query: 386 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAH--LLHKSPSVPYRPS 213
CS + + C + ++V CS + V + ++C+ + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 212 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 120
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = +1
Query: 346 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSRT 513
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 514 RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 609
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 563 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 664
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
Length = 798
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/88 (26%), Positives = 33/88 (37%)
Frame = +1
Query: 364 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPPVSCW 543
L+ APE P+ EAP PK + ++ Q + TP +Q +L +T V
Sbjct: 330 LKKAPEHKPLDEVEAPQFPKLHHVELPQTEKKVDETPRF---VQPLLKKTTVNVKGPDQK 386
Query: 544 TPATVSPTPCPSTKDTHSPTPSCVWT*P 627
A P P +P T P
Sbjct: 387 DKAEPEPLHLPKLHHVETPNKDTTQTEP 414
>SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 493 QAVLSRTRPVVPPVSCWTPATVSPTPC 573
Q RT+P VP T A+++P+PC
Sbjct: 151 QVATIRTKPAVPNTCIKTEASLTPSPC 177
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +3
Query: 372 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAY------ASGRTTG 533
R R P PA+ ++R P I H R VR+ RA A ASG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 534 IVLDSGDGVS 563
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 426 QQREDDPDHVRNIQHARHVRRHPSRALAYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 602
Q+R D V N+ H R + +A SG+T+ S D V PI G LPH
Sbjct: 210 QERRSTHDVVPNLGHGVASRHAQASPIAMTSGKTS----QSTDAVCRRPPIERG-TLPH 263
>SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 463 FNTPAMYVAIQAVLSRTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 609
F P A+ + +R +PP+ PA P P+T SP P+
Sbjct: 321 FFGPKALSAVTVIENRISAPLPPIPRTRPAMTPPPISPTTGPPKSPAPT 369
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = +1
Query: 361 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVP 528
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 529 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 618
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,298,079
Number of Sequences: 59808
Number of extensions: 645499
Number of successful extensions: 2595
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 2132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2567
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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