Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021752
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    67   2e-13
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    60   3e-11
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    34   0.001
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    34   0.001
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                28   0.097
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    25   0.68 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.8  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 66.9 bits (156), Expect = 2e-13
 Identities = 30/58 (51%), Positives = 36/58 (62%)
 Frame = +3

Query: 510 AEIVSALGYLHSEGIIYRXXXXXXXXXXXXGHIKIADFGLCKVNITYGRTTKTFCGTP 683
           +EI   L +LH  GI+YR            GHIKIADFG+CK  I+  +TTKTFCGTP
Sbjct: 92  SEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKTFCGTP 149



 Score = 59.3 bits (137), Expect = 3e-11
 Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 DEVAHTITENRVLK-KTKHPFLTALRYSFQTADRVCFVMEYANGGELFFHLSRERSFTED 492
           D+V  T+ E RVL   TK PFL  L   FQT DR+ FVMEY NGG+L + + +   F E 
Sbjct: 26  DDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKEP 85

Query: 493 RTRFY 507
              FY
Sbjct: 86  VAVFY 90


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 59.7 bits (138), Expect = 3e-11
 Identities = 29/68 (42%), Positives = 37/68 (54%)
 Frame = +3

Query: 489 GPHQVLRAEIVSALGYLHSEGIIYRXXXXXXXXXXXXGHIKIADFGLCKVNITYGRTTKT 668
           G  +   A +V A  YLHS  IIYR            G++K+ DFG  K  + +GR T T
Sbjct: 466 GTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAK-RLDHGRKTWT 524

Query: 669 FCGTPEYL 692
           FCGTPEY+
Sbjct: 525 FCGTPEYV 532



 Score = 34.3 bits (75), Expect = 0.001
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 328 HTITENRVLKKTKHPFLTALRYSFQTADRVCFVMEYANGGELFFHLSRERSFTEDRTRFY 507
           H ++E R++ +    F+  L  +F+    +  +ME   GGEL+  L  +  F +  TRFY
Sbjct: 412 HIMSEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFY 471


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +3

Query: 513 EIVSALGYLHSEGIIYRXXXXXXXXXXXXGHIKIADFGLCKVNITYGRTTKTFCGTPEYL 692
           +++  + YLHS+G+++R               K+ DFG C   IT      +  GTP ++
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC---ITEVMMLGSIVGTPVHM 761


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +3

Query: 513 EIVSALGYLHSEGIIYRXXXXXXXXXXXXGHIKIADFGLCKVNITYGRTTKTFCGTPEYL 692
           +++  + YLHS+G+++R               K+ DFG C   IT      +  GTP ++
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC---ITEVMMLGSIVGTPVHM 799


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 0.097
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = +3

Query: 516 IVSALGYLHSEGIIYRXXXXXXXXXXXXGHIKIADFGLCKVNITYGRTTKTFCGTPEY 689
           I  AL + H+ GI++             G  K+ DFG   V I        F GTP Y
Sbjct: 164 ITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFG-SSVLIGAPNEIDKFYGTPGY 220


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 639 NITYGRTTKTFC 674
           N+T G TTKTFC
Sbjct: 447 NVTDGETTKTFC 458


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 384 SRQKWMLGLLEHSVLG 337
           S Q W++GLL  S++G
Sbjct: 5   SHQVWLVGLLAFSLVG 20


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 384 SRQKWMLGLLEHSVLG 337
           S Q W++GLL  S++G
Sbjct: 5   SHQVWLVGLLAFSLVG 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,704
Number of Sequences: 438
Number of extensions: 4423
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)