Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021751
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 183 NRRSSLGGPRNHRAVYHWIRVPVVNNP 263
           N R    GPR   AVY  +R+  V+ P
Sbjct: 179 NIRLKRAGPRTESAVYEPVRIMGVHRP 205


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 133 GPPKGIPALKAHIIANKIDVALWGVRV 213
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +3

Query: 279 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 458
           K LL+N    +++++  I  +E + +    +  F   + + LFY  +  +V  NL   VP
Sbjct: 136 KTLLSNL--ESIQIYS-IKPKERNSNHWVRSGLFALITGNVLFYPFLPSDVSYNLFSFVP 192

Query: 459 IFLFALLH 482
           + + AL H
Sbjct: 193 LVVNALDH 200


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = +2

Query: 545 LLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYF 688
           LL+ +  F   ++L   A     +  + L+   + +C L+     YYF
Sbjct: 254 LLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYF 301


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +3

Query: 279 KALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVP 458
           K LL+N    +++++  I  +E + +    +  F   + + LFY  +  +V  NL   VP
Sbjct: 92  KTLLSNL--ESIQIYS-IKPKERNSNHWVRSGLFALITGNVLFYPFLPSDVSYNLFSFVP 148

Query: 459 IFLFALLH 482
           + + AL H
Sbjct: 149 LVVNALDH 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,210
Number of Sequences: 336
Number of extensions: 3546
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)