Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021751
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein. 94 5e-19
BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 3... 94 5e-19
AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein. 94 5e-19
AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens ... 94 5e-19
AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens ... 94 5e-19
>CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein.
Length = 247
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +3
Query: 252 VNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 431
++ S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N
Sbjct: 48 LHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNS 105
Query: 432 VPNLLILVPIFLFALLHAASYSLTIL 509
P + + P+ LF+LLHAA+Y+ +L
Sbjct: 106 YPVTMSIFPVLLFSLLHAATYTKKVL 131
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 509 DTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYF 688
D G NSL + R ++ + +NIL+ A EI L P + M G L+ PF+YY F
Sbjct: 132 DARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRF 191
Query: 689 VTWRYASRRNPYTRNTF 739
+T RY+SRRNPY R F
Sbjct: 192 LTLRYSSRRNPYCRTLF 208
Score = 36.7 bits (81), Expect = 0.088
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLL 255
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PLL
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLL 46
>BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 33
protein.
Length = 247
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +3
Query: 252 VNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 431
++ S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N
Sbjct: 48 LHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNS 105
Query: 432 VPNLLILVPIFLFALLHAASYSLTIL 509
P + + P+ LF+LLHAA+Y+ +L
Sbjct: 106 YPVTMSIFPVLLFSLLHAATYTKKVL 131
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 509 DTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYF 688
D G NSL + R ++ + +NIL+ A EI L P + M G L+ PF+YY F
Sbjct: 132 DARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRF 191
Query: 689 VTWRYASRRNPYTRNTF 739
+T RY+SRRNPY R F
Sbjct: 192 LTLRYSSRRNPYCRTLF 208
Score = 36.7 bits (81), Expect = 0.088
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLL 255
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PLL
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLL 46
>AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein.
Length = 247
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +3
Query: 252 VNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 431
++ S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N
Sbjct: 48 LHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNS 105
Query: 432 VPNLLILVPIFLFALLHAASYSLTIL 509
P + + P+ LF+LLHAA+Y+ +L
Sbjct: 106 YPVTMSIFPVLLFSLLHAATYTKKVL 131
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 509 DTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYF 688
D G NSL + R ++ + +NIL+ A EI L P + M G L+ PF+YY F
Sbjct: 132 DARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRF 191
Query: 689 VTWRYASRRNPYTRNTF 739
+T RY+SRRNPY R F
Sbjct: 192 LTLRYSSRRNPYCRTLF 208
Score = 36.7 bits (81), Expect = 0.088
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLL 255
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PLL
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLL 46
>AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13000 fis, clone NT2RP3000333, highly similar to
Rattus norvegicus db83 mRNA. ).
Length = 247
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +3
Query: 252 VNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 431
++ S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N
Sbjct: 48 LHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNS 105
Query: 432 VPNLLILVPIFLFALLHAASYSLTIL 509
P + + P+ LF+LLHAA+Y+ +L
Sbjct: 106 YPVTMSIFPVLLFSLLHAATYTKKVL 131
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 509 DTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYF 688
D G NSL + R ++ + +NIL+ A EI L P + M G L+ PF+YY F
Sbjct: 132 DARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRF 191
Query: 689 VTWRYASRRNPYTRNTF 739
+T RY+SRRNPY R F
Sbjct: 192 LTLRYSSRRNPYCRTLF 208
Score = 36.7 bits (81), Expect = 0.088
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLL 255
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PLL
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLL 46
>AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ10525 fis, clone NT2RP2000892. ).
Length = 247
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +3
Query: 252 VNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 431
++ S + +ALLANA TSALRLHQR+P LSR F+A+ LEDS HYL YSLIF+N
Sbjct: 48 LHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNS 105
Query: 432 VPNLLILVPIFLFALLHAASYSLTIL 509
P + + P+ LF+LLHAA+Y+ +L
Sbjct: 106 YPVTMSIFPVLLFSLLHAATYTKKVL 131
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 509 DTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYF 688
D G NSL + R ++ + +NIL+ A EI L P + M G L+ PF+YY F
Sbjct: 132 DARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRF 191
Query: 689 VTWRYASRRNPYTRNTF 739
+T RY+SRRNPY R F
Sbjct: 192 LTLRYSSRRNPYCRTLF 208
Score = 36.7 bits (81), Expect = 0.088
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 DTGP--PKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLL 255
DT P P+G A++ ++ NK+D A+W R+ TV C+ +V PLL
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLL 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,239,761
Number of Sequences: 237096
Number of extensions: 2274849
Number of successful extensions: 7519
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7514
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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