Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021751
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical...    74   9e-14
Z74042-14|CAE11313.1|  311|Caenorhabditis elegans Hypothetical p...    34   0.093
AF068709-3|AAC19254.1|  332|Caenorhabditis elegans Serpentine re...    33   0.28 
Z81508-5|CAB04138.1|  357|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine re...    29   3.5  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    29   3.5  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    29   3.5  
Z81508-3|CAB04144.1|  288|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL023858-1|CAA19568.2|  328|Caenorhabditis elegans Hypothetical ...    29   4.6  
AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical ...    29   4.6  
AL021503-9|CAA16417.2|  572|Caenorhabditis elegans Hypothetical ...    28   6.1  
AL021503-7|CAI79271.1|  277|Caenorhabditis elegans Hypothetical ...    28   6.1  
CU457741-18|CAM36360.1|  365|Caenorhabditis elegans Hypothetical...    28   8.0  
AL021503-2|CAA16421.1|  320|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical
           protein Y37D8A.17 protein.
          Length = 271

 Score = 74.1 bits (174), Expect = 9e-14
 Identities = 35/81 (43%), Positives = 52/81 (64%)
 Frame = +3

Query: 267 SAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLL 446
           SA+YK   A+AAT ALRLH RI   + +L+  F+ R  +EDS HYL YS++F+   P  +
Sbjct: 77  SAYYKIFAASAATFALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSM 135

Query: 447 ILVPIFLFALLHAASYSLTIL 509
             +P+ ++A LHA ++   IL
Sbjct: 136 AALPVTIYAALHACTFMTKIL 156



 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = +2

Query: 569 QSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYFVTWRYASRRNPYTRNTF 739
           Q++N L   A +EI L P+++ +   G   L+ PF YY F++ RYASRRNP TR  F
Sbjct: 176 QTQNALGIIACSEIFLVPLLVSLIFSGKGSLLLPFAYYRFLSLRYASRRNPSTRQAF 232


>Z74042-14|CAE11313.1|  311|Caenorhabditis elegans Hypothetical
           protein T11F9.18 protein.
          Length = 311

 Score = 34.3 bits (75), Expect = 0.093
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
 Frame = +3

Query: 234 WIRVPVVNNPVSAFYKALLANAATSAL-RLHQRIPAREISLSRDFMARFFLEDSAHYLFY 410
           ++ V   + P++A Y  L   A+   L +L   +  R ISL R+F+   +++ + H +F 
Sbjct: 194 FVGVAASSQPLAAVYFGLSVYASKLGLQKLKASLSQRTISLQRNFLHSLYIQTAVHVIFI 253

Query: 411 SLIFMNVVPNLLILVPIFLFALLHAASY---SLTILILLV 521
           S+       + +I +P  +  +L A      SL+ L L++
Sbjct: 254 SIPLGIFFLSFIIWIPSNMSYILTAMCTQHGSLSTLALMI 293


>AF068709-3|AAC19254.1|  332|Caenorhabditis elegans Serpentine
           receptor, class t protein28 protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 166 HIIANKIDVALWGVRVITVLCTIGYVFPLLTIQCRHSTKRYSRTRRL 306
           ++I N +DV LW + +  VL   G+  P+L   C + T R    RRL
Sbjct: 263 YVIMNFVDVPLWIIMMGHVLWQFGHGAPVLIYLCLNRTLRSGLLRRL 309


>Z81508-5|CAB04138.1|  357|Caenorhabditis elegans Hypothetical
           protein F20E11.7 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 587 GGCSATGTRPGR*ADEPPTTNFDQEYQDSQGIRSS 483
           G  + TGT PG+ A+   T   D+ +QD  GIR +
Sbjct: 160 GALTFTGTGPGQIAETSVTCGDDKIWQDPNGIRGN 194


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
           protein K08C7.3b protein.
          Length = 3672

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 51  LYNFSCSSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 176
           +Y     ST +  LN Y       ++ WS   +P +   H C
Sbjct: 60  IYCSLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
           protein K08C7.3a protein.
          Length = 3704

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 51  LYNFSCSSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 176
           +Y     ST +  LN Y       ++ WS   +P +   H C
Sbjct: 60  IYCSLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 93  NQYGRSKSASRRHWSTKRHPSLESSHHCQ*NRRSSLGGPR 212
           + YGR  ++SRR +  ++ PS  S+ H   N R+SL  P+
Sbjct: 161 DNYGREPASSRRPYPPQQPPS-TSAPHSSPNNRTSLYNPQ 199


>AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine
           receptor, class n protein1 protein.
          Length = 361

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 387 DSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILILLVK 524
           ++  +L    +F N++P ++I  P+FL A     SY       L+K
Sbjct: 247 ETHRHLTLLALFQNLIPAVVIAFPVFLVAFSFVMSYESDTFAELIK 292


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
           chain protein.
          Length = 3704

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 51  LYNFSCSSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 176
           +Y     ST +  LN Y       ++ WS   +P +   H C
Sbjct: 60  IYCSLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
           protein.
          Length = 3704

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 51  LYNFSCSSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 176
           +Y     ST +  LN Y       ++ WS   +P +   H C
Sbjct: 60  IYCSLTGSTQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>Z81508-3|CAB04144.1|  288|Caenorhabditis elegans Hypothetical
           protein F20E11.5 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 587 GGCSATGTRPGR*ADEPPTTNFDQEYQDSQGIRSS 483
           G    +GT PG+ A+   T   D+ +QD+ G+R +
Sbjct: 242 GALETSGTGPGQIAETSITCGADKIWQDANGVRGN 276


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 302 DFSAAATSKNSSTRDLPLAGFHGEV 376
           +F   +TS     +D+PL GFHGE+
Sbjct: 317 NFVLNSTSSFEPLKDVPLCGFHGEI 341


>U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical
           protein F54D8.6 protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 559 GRVPVAEHPPGRGARRDRAVPGRTHHGVVRP 651
           G VP  +  PGRG+R     PG    GV RP
Sbjct: 554 GGVPGVDRAPGRGSRGIDRPPGGDSRGVDRP 584


>AL023858-1|CAA19568.2|  328|Caenorhabditis elegans Hypothetical
           protein ZK285.1 protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +3

Query: 402 LFYSLIFMNVVPNLLILVP--IFLFALLHAASYSLTILILLVKI 527
           LFYSLIF   +P +L+ +P  I L   +    ++L + +L + I
Sbjct: 247 LFYSLIFQTAIPCVLMYLPAGIILSVPMFNVGFNLEVPLLSITI 290


>AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10a protein.
          Length = 459

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 587 GGCSATGTRPGR*ADEPPTTNFDQEYQDSQGIRSS 483
           G    +GT PG+ A+   T   D+ +QD+ G+R +
Sbjct: 413 GALETSGTGPGQIAETSVTCGNDKIWQDANGVRGN 447



 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 587 GGCSATGTRPGR*ADEPPTTNFDQEYQDSQGIRSS 483
           G  + TGT PG+ A+   T   D  + DS+GIR +
Sbjct: 145 GELTFTGTGPGKIAEASVTCGNDAVWVDSRGIRGN 179


>AL021503-9|CAA16417.2|  572|Caenorhabditis elegans Hypothetical
           protein Y68A4A.5 protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 587 GGCSATGTRPGR*ADEPPTTNFDQEYQDSQGIRSS 483
           G  + TGT PG+ A+   T   D  + DS+GIR +
Sbjct: 151 GELTFTGTGPGKIAEASVTCGNDAVWVDSRGIRGN 185


>AL021503-7|CAI79271.1|  277|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10b protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 587 GGCSATGTRPGR*ADEPPTTNFDQEYQDSQGIRSS 483
           G  + TGT PG+ A+   T   D  + DS+GIR +
Sbjct: 145 GELTFTGTGPGKIAEASVTCGNDAVWVDSRGIRGN 179


>CU457741-18|CAM36360.1|  365|Caenorhabditis elegans Hypothetical
           protein C42C1.5 protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 392 RALSILFTHFHERRAQFVNIGANLFICAATRCFVFLDYPDTLGQN 526
           + +S+   H H  ++  +  G+N+   A  R  V +D   T+G+N
Sbjct: 226 KGMSLFLNHCHTTKSDKLETGSNIHPTATIRGNVMVDPSATVGEN 270


>AL021503-2|CAA16421.1|  320|Caenorhabditis elegans Hypothetical
           protein Y68A4A.3 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 402 LFYSLIFMNVVPNLLILVP 458
           LFYSLIF + +P LL+ +P
Sbjct: 239 LFYSLIFQSAIPCLLMYLP 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,974,170
Number of Sequences: 27780
Number of extensions: 343139
Number of successful extensions: 1368
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)