Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021748
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -2

Query: 277 KSIPMTVPC-PYLSPSCRRHK-RPRPPKLARTNSTAS*PCKIYRLKNSEINKNLN 119
           +S P+++   PY S     H  + RPP+ +  +++ +  CK+Y   +SE  +N N
Sbjct: 37  RSFPLSLGMSPYASSQHHHHHLQARPPQDSPYDASVAAACKLY---SSEGQQNSN 88


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 429 TNPENTVFDAKRLIGREWSDQTVQHDVSS 515
           T PE     AK +IG+++S   V H  +S
Sbjct: 462 TAPEQVQRAAKCIIGKDYSLPMVNHAAAS 490


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 343 RVTASHLHTWP 375
           ++T +HLH WP
Sbjct: 206 KMTPNHLHIWP 216


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 343 RVTASHLHTWP 375
           ++T +HLH WP
Sbjct: 206 KMTPNHLHIWP 216


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 343 RVTASHLHTWP 375
           ++T +HLH WP
Sbjct: 206 KMTPNHLHIWP 216


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 166 CKIYRLKNSEINKNLNKIIF 107
           C   +LK  EI  ++NK+IF
Sbjct: 288 CDKVQLKIGEIKYSVNKLIF 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,722
Number of Sequences: 336
Number of extensions: 3602
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)