Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021748
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 166 1e-41
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 141 6e-34
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 134 7e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 87 1e-17
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 81 1e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 36 0.034
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 36 0.034
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 32 0.42
SB_53571| Best HMM Match : MORN (HMM E-Value=1.12104e-44) 30 1.7
SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0) 29 3.0
SB_2805| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3) 29 5.2
SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 28 9.1
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 166 bits (404), Expect = 1e-41
Identities = 76/89 (85%), Positives = 82/89 (92%)
Frame = +3
Query: 255 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 434
GTVIGIDLGTTYSCVGV+KNGRVEIIANDQGNRITPSYVAFT++GERLIGD AKNQLTTN
Sbjct: 701 GTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTN 760
Query: 435 PENTVFDAKRLIGREWSDQTVQHDVSSSP 521
PENTVFDAKRLIGR W D +VQ+D+ P
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFP 789
Score = 137 bits (331), Expect = 1e-32
Identities = 66/77 (85%), Positives = 68/77 (88%)
Frame = +2
Query: 509 KFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 688
KFFPFKVV+KN KPHVQV+ K FA EEISAMVLTKMKETAEAYLGKKVTHAVVTVP
Sbjct: 786 KFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 845
Query: 689 AYFNDAQRQATKDAGTI 739
AYFNDAQRQATKDAG I
Sbjct: 846 AYFNDAQRQATKDAGAI 862
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 141 bits (341), Expect = 6e-34
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 2/113 (1%)
Frame = +3
Query: 249 GHGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLT 428
G IGIDLGTTYSCVGV++NG+VEIIANDQGNR TPSYV FT D ERL+GDAAKNQ+
Sbjct: 2 GKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVA 60
Query: 429 TNPENTVFDAKRLIGREWSDQTVQHDVSSSPSR--SLKRTANLMFKYKLHKAT 581
NPENT+FDAKRLIGR + D TVQ D+ P + S + +YK + T
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKT 113
Score = 115 bits (277), Expect = 4e-26
Identities = 54/77 (70%), Positives = 64/77 (83%)
Frame = +2
Query: 509 KFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 688
K +PFK++ N+KP +QV+ K FA EEIS+MVL KMKETAEAYLG+KVT AV+TVP
Sbjct: 88 KLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147
Query: 689 AYFNDAQRQATKDAGTI 739
AYFND+QRQATKDAGTI
Sbjct: 148 AYFNDSQRQATKDAGTI 164
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 134 bits (324), Expect = 7e-32
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +3
Query: 264 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 443
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ D ERLIGDAAKNQ+ NPEN
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPEN 65
Query: 444 TVFDAKRLIGREWSDQTVQHDVSSSP 521
TVFDAKRLIGR++ D V D++ P
Sbjct: 66 TVFDAKRLIGRKFDDPVVARDMTHWP 91
Score = 109 bits (261), Expect = 3e-24
Identities = 52/75 (69%), Positives = 61/75 (81%)
Frame = +2
Query: 515 FPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 694
+PF V+ + +P +QV+ K F PEEIS+MVLTKMKETAEAYLG KVT AVVTVPAY
Sbjct: 90 WPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAY 149
Query: 695 FNDAQRQATKDAGTI 739
F+D+QRQATKDAGTI
Sbjct: 150 FHDSQRQATKDAGTI 164
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (315), Expect = 9e-31
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +3
Query: 264 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 443
IGIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAFT D ERL+GDAAKNQ+ NP N
Sbjct: 7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DEERLVGDAAKNQVAMNPTN 65
Query: 444 TVFDAKRLIGREWSDQTVQHDV 509
T+FDAKRLIGR + D V+ D+
Sbjct: 66 TIFDAKRLIGRRFDDPGVKDDM 87
Score = 99.1 bits (236), Expect = 3e-21
Identities = 50/74 (67%), Positives = 57/74 (77%)
Frame = +2
Query: 512 FFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPA 691
FF +VV + +P V+V+ K F EEIS+MVL KMKETAEAYLG KVT AVVTVPA
Sbjct: 114 FFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Query: 692 YFNDAQRQATKDAG 733
YFND+QRQATKDAG
Sbjct: 174 YFNDSQRQATKDAG 187
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +2
Query: 599 EISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTI 739
+IS+MVL KMKETAEAYLG KVT AVVTVPAYFND+QRQATKDAG I
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVI 257
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/79 (49%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = +3
Query: 261 VIGIDLGTTYSCVGVYK--NGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 434
+IGIDLGTTYSCVG Y+ +GR++I +++ +++ PS VAFT G L+G+ A +Q N
Sbjct: 33 IIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEIN 91
Query: 435 PENTVFDAKRLIGREWSDQ 491
P+NT++DAKR IG+ ++ Q
Sbjct: 92 PKNTIYDAKRFIGKTFTKQ 110
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 509 KFFPFKVV-EKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTV 685
K + F+V +K V V PEEI V+ K++ AE L VT AV++V
Sbjct: 117 KLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSV 176
Query: 686 PAYFNDAQRQATKDAGTI 739
PA F+ QR AT A ++
Sbjct: 177 PAEFDIKQRNATVKAASL 194
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +2
Query: 554 VQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAG 733
+ V+ + FAPE+ISA+VL ++K AEA+LG+ V AV+TVPA+FNDAQRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 734 TI 739
TI
Sbjct: 62 TI 63
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +2
Query: 518 PFKVVE-KNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 694
P+KVVE N +QVQ +VF+PE++ AM+ T++K TAE L KVT V++VP+Y
Sbjct: 147 PYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSY 206
Query: 695 FNDAQRQATKDA 730
+ D QR+ DA
Sbjct: 207 YTDRQRRCMLDA 218
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 258 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQ 422
+V+G D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 2 SVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSL-GDKQRLIGTSGKNQ 55
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 423 LTTNPENTVFDAKRLIGREWSDQTVQHDVSSSP 521
+ +N +NT+ KR IGR++SD VQ ++ P
Sbjct: 115 MISNLKNTISQFKRFIGRKFSDPAVQKEIPHLP 147
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 533 EKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQR 712
+K PHV+ Q D F PEE+ M+L + E + + V+TVP +FN A+R
Sbjct: 63 KKLDNPHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAER 121
Query: 713 QA 718
+A
Sbjct: 122 RA 123
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 312 NGRVEIIANDQGNRITPSYVAFTQDGERLI 401
+G IIAND G+R+TP+ VAF+ D E+LI
Sbjct: 82 DGNTTIIANDAGDRVTPAMVAFS-DTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 324 EIIANDQGNRITPSYVAFTQDGERL 398
++I N +G+R TPS VAFT +GERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 32.3 bits (70), Expect = 0.42
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 201 FGGRGRLCRR----QEGER*GHGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSY 368
F RG R +EG+ G + +D V Y N +V + A D G+++T Y
Sbjct: 693 FDSRGNFVSRLRPFEEGDGLGQFCRLAVDHHDRV-LVSDYHNRKVHVFARDDGSQVT-CY 750
Query: 369 VAFTQDGERLIGDAAKNQLTTNPENTVFDA 458
A T +G+ L+ A + +T N + V A
Sbjct: 751 TAVTDEGDGLLN--APSGITVNSKGEVIVA 778
>SB_53571| Best HMM Match : MORN (HMM E-Value=1.12104e-44)
Length = 221
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 177 AVEFVRASFGGRGRLCRRQEGER*GHGTVIGIDLGTTYSCVGVYKNGR 320
A+ +R GR R +GER G+GT + + G TY G+Y NG+
Sbjct: 10 AINELRVIVEGRYEGERNNDGERHGYGTAL-LTSGDTYQ--GLYNNGK 54
>SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1264
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 499 CTVWSLHSRPIRRLASKTVFSGLVVSWFLAASPI 398
C VW + +RRL VF G+++ + +AAS I
Sbjct: 387 CAVWKVMRYKVRRLVEHKVFEGIIL-FLIAASSI 419
>SB_2805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 649 PWKKGYSCCCYSACLFQ*CSTSSNQ 723
PW + SCCCY++CL T S Q
Sbjct: 46 PWME--SCCCYNSCLAPQTFTQSGQ 68
>SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3)
Length = 787
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 481 HSRPIRRLASKTVFSGLVVSWF 416
H I RL+S+ VFSG V+ WF
Sbjct: 114 HKILIDRLSSRFVFSGTVIQWF 135
>SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -2
Query: 163 KIYRLKNSEINKNLNKIIFTATLRSL*NAFIKHLRIQTVHRY 38
+++ ++ +++ +++ ++ A LR L N FIK R+ VH Y
Sbjct: 169 RLFEMEATDLFRDIQELPRNAALRKL-NDFIKRARLAKVHAY 209
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 526 LEGEELTSCCTVWSLHSRPIRRLASKTVFSGLV 428
LE T C +W HS I++ ++K +FSG++
Sbjct: 25 LESRYRTGQC-MWEKHSFSIKKTSTKNLFSGMI 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,053,190
Number of Sequences: 59808
Number of extensions: 452816
Number of successful extensions: 1135
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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