Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021747X
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 146 7e-36
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 146 7e-36
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 146 7e-36
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 131 2e-31
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 110 6e-25
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 61 5e-10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 61 5e-10
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 57 8e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 57 8e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 57 8e-09
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 7e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 36 0.015
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 36 0.020
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.14
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.14
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.00
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 1.00
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.3
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 2.3
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 29 2.3
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z83128-2|CAB05636.1| 412|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 4.0
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 4.0
AY305830-1|AAR11975.1| 418|Caenorhabditis elegans nuclear recep... 28 4.0
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 4.0
AF273812-1|AAG15161.1| 225|Caenorhabditis elegans nuclear recep... 28 4.0
AF273811-1|AAG15160.1| 415|Caenorhabditis elegans nuclear recep... 28 4.0
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 4.0
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 5.3
Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical pr... 27 7.0
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 27 7.0
Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical pr... 27 9.3
U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical pr... 27 9.3
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 146 bits (354), Expect = 7e-36
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = +3
Query: 252 GKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQA 431
GKGSFK AWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHR+ IKNMI GTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 432 DCAVLSVAAGTGEFEA 479
DCAVL VA GTGEFEA
Sbjct: 110 DCAVLVVACGTGEFEA 125
Score = 110 bits (264), Expect = 6e-25
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSK 270
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 146 bits (354), Expect = 7e-36
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = +3
Query: 252 GKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQA 431
GKGSFK AWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHR+ IKNMI GTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 432 DCAVLSVAAGTGEFEA 479
DCAVL VA GTGEFEA
Sbjct: 110 DCAVLVVACGTGEFEA 125
Score = 110 bits (264), Expect = 6e-25
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSK 270
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 146 bits (354), Expect = 7e-36
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = +3
Query: 252 GKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQA 431
GKGSFK AWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHR+ IKNMI GTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 432 DCAVLSVAAGTGEFEA 479
DCAVL VA GTGEFEA
Sbjct: 110 DCAVLVVACGTGEFEA 125
Score = 110 bits (264), Expect = 6e-25
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSK 270
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 131 bits (317), Expect = 2e-31
Identities = 61/68 (89%), Positives = 64/68 (94%)
Frame = +3
Query: 252 GKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQA 431
GKGSFK AWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHR+ IKNMI GTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 432 DCAVLSVA 455
DCAVL VA
Sbjct: 110 DCAVLVVA 117
Score = 110 bits (264), Expect = 6e-25
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSK 270
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 110 bits (264), Expect = 6e-25
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSK 270
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
Score = 33.5 bits (73), Expect = 0.081
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 252 GKGSFKDAWVLDKLKAER 305
GKGSFK AWVLDKLK +
Sbjct: 50 GKGSFKYAWVLDKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 99.1 bits (236), Expect = 1e-21
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3
Query: 249 NGKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQ 428
NGK SF AWVLD+ + ERERG+T+DI FETS + ++DAPGH++ I NMI GTSQ
Sbjct: 212 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
Query: 429 ADCAVLSVAAGTGEFE 476
AD A+L V A TGEFE
Sbjct: 272 ADAAILVVNATTGEFE 287
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +1
Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 214
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 99.1 bits (236), Expect = 1e-21
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3
Query: 249 NGKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQ 428
NGK SF AWVLD+ + ERERG+T+DI FETS + ++DAPGH++ I NMI GTSQ
Sbjct: 230 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
Query: 429 ADCAVLSVAAGTGEFE 476
AD A+L V A TGEFE
Sbjct: 290 ADAAILVVNATTGEFE 305
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +1
Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 232
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/89 (43%), Positives = 56/89 (62%)
Frame = +3
Query: 210 QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 389
+ Y RE +E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKE----KGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 390 REAIKNMIRGTSQADCAVLSVAAGTGEFE 476
+ + NMI G +QAD AVL ++A GEFE
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFE 226
Score = 68.5 bits (160), Expect = 2e-12
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +1
Query: 109 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 261
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G++
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRE 154
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 60.9 bits (141), Expect = 5e-10
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+DK K E++RGITI++A +E+ + D PGH + IKNMI GTSQ D AVL +AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 462 TGEFE 476
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKSTTT 177
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 60.9 bits (141), Expect = 5e-10
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+DK K E++RGITI++A +E+ + D PGH + IKNMI GTSQ D AVL +AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 462 TGEFE 476
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKSTTT 177
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 56.8 bits (131), Expect = 8e-09
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D E+ RGITI+ ++ET+K + ID PGH + IKNMI G +Q + A+L VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 462 TG 467
G
Sbjct: 147 DG 148
Score = 33.1 bits (72), Expect = 0.11
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 56.8 bits (131), Expect = 8e-09
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D E+ RGITI+ ++ET+K + ID PGH + IKNMI G +Q + A+L VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 462 TG 467
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.11
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 56.8 bits (131), Expect = 8e-09
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D E+ RGITI+ ++ET+K + ID PGH + IKNMI G +Q + A+L VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 462 TG 467
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.11
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 279 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
+LDKL+ ERERGIT+ Y + +ID PGH + + R + D +L VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 459 GTG 467
G
Sbjct: 136 NQG 138
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 246
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.3 bits (90), Expect = 7e-04
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 237 GGPGNGKGSFKDAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHREAIKNMI 413
G +GK + DA ++ A GIT I + E +K VT +D PGH
Sbjct: 163 GHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRA 222
Query: 414 RGTSQADCAVLSVAAGTG 467
RG AD VL VAA G
Sbjct: 223 RGAKGADIVVLVVAADDG 240
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.9 bits (79), Expect = 0.015
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D + ER+RGITI A + + IID PGH + + R D AVL V G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVL-VLCG 145
Query: 462 TG 467
G
Sbjct: 146 VG 147
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGID 210
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 35.5 bits (78), Expect = 0.020
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 279 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 389
V D L ERERGIT+ A + + + +ID PGH
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGH 100
Score = 34.3 bits (75), Expect = 0.046
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSKMLGYWTN 291
+I+ GH+D S GH +K GI E FE E ++ + P++ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 201
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 201
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.9 bits (64), Expect = 1.00
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +3
Query: 270 DAWVLDKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
DA D L E++RG +I I + Y + IID PGH M AD
Sbjct: 167 DARFTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLAD 226
Query: 435 CAVLSVAAGTG 467
V+ V A G
Sbjct: 227 GVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.9 bits (64), Expect = 1.00
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +3
Query: 270 DAWVLDKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
DA D L E++RG +I I + Y + IID PGH M AD
Sbjct: 42 DARFTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLAD 101
Query: 435 CAVLSVAAGTG 467
V+ V A G
Sbjct: 102 GVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTT 177
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTT 177
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 261
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 261
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 261
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 360 YVTIIDAPGHREAIKNMIRGTSQADCAVLSVA 455
+V+ +D PGH + M+ G + D A L VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 201 WY*QTYHREVREGGPGNGKGSFK-DAWVLDKLKAERERGITIDIALWKFETSKYYVTII 374
WY Q R + G + F D W+++KL R +T W ++ YVT I
Sbjct: 1417 WYTQNSMRLMFYNGDVDTICQFLGDQWLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83128-2|CAB05636.1| 412|Caenorhabditis elegans Hypothetical
protein W01D2.2a protein.
Length = 412
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 198 WWY*QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITID 326
WW T+ + G GS+ A + D K+E + G+ ID
Sbjct: 246 WWLCSTWSAKAGCNGVCYSNGSYHPASISDMPKSEGKHGVRID 288
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 201 WY*QTYHREVREGGPGNGKGSFK-DAWVLDKLKAERERGITIDIALWKFETSKYYVTII 374
WY Q R + G + F D W+++KL R +T W ++ YVT I
Sbjct: 1417 WYTQNSMRLMFYNGDVDTICQFLGDQWLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 192
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AY305830-1|AAR11975.1| 418|Caenorhabditis elegans nuclear receptor
NHR-61 protein.
Length = 418
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 198 WWY*QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITID 326
WW T+ + G GS+ A + D K+E + G+ ID
Sbjct: 252 WWLCSTWSAKAGCNGVCYSNGSYHPASISDMPKSEGKHGVRID 294
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 201 WY*QTYHREVREGGPGNGKGSFK-DAWVLDKLKAERERGITIDIALWKFETSKYYVTII 374
WY Q R + G + F D W+++KL R +T W ++ YVT I
Sbjct: 1417 WYTQNSMRLMFYNGDVDTICQFLGDQWLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AF273812-1|AAG15161.1| 225|Caenorhabditis elegans nuclear receptor
NHR-61 protein.
Length = 225
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 198 WWY*QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITID 326
WW T+ + G GS+ A + D K+E + G+ ID
Sbjct: 59 WWLCSTWSAKAGCNGVCYSNGSYHPASISDMPKSEGKHGVRID 101
>AF273811-1|AAG15160.1| 415|Caenorhabditis elegans nuclear receptor
NHR-61 protein.
Length = 415
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 198 WWY*QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITID 326
WW T+ + G GS+ A + D K+E + G+ ID
Sbjct: 249 WWLCSTWSAKAGCNGVCYSNGSYHPASISDMPKSEGKHGVRID 291
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 100 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 192
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 120 LFLAHFWLVELWVY*FHFFTSQNNIFLTLTTDYKLRV 10
+F F ++ + V HF SQ+N+ L LT D + +
Sbjct: 13 IFYVLFLIIPIKVTSIHFVDSQHNVILILTDDQDIEL 49
>Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical
protein C27B7.6 protein.
Length = 465
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 190 YKCGGIDKRTIEKFEKEAQEMGKDPSK 270
Y +DKRT+ FEK Q + ++P K
Sbjct: 317 YDRSKLDKRTLHDFEKNFQPLDENPRK 343
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452
IID PGH RG+S D A+L V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical
protein F55A11.5 protein.
Length = 391
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 181 HLIYKCGGIDKRTIEKFEKEAQEMGKDPS 267
+L ++ GGIDK I K+++ + + K PS
Sbjct: 359 YLSWRYGGIDKYIIFKWQESRKSLQKSPS 387
>U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical
protein C05D11.8 protein.
Length = 873
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 278 PSIFEGSFPISWASFSNFSMVRLSIPPHL*IK*PVVVDLPESTCPMTTMLM 126
P+++E F W+ SN +LS P H + ++ L E+ M T+LM
Sbjct: 23 PTVWEQLFETKWSVVSNILERKLSDPEHK-VVYDELMSLLENMTNMCTLLM 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,785,703
Number of Sequences: 27780
Number of extensions: 202702
Number of successful extensions: 693
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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