BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021747X (481 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 87 6e-18 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 70 9e-13 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 57 7e-09 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 57 7e-09 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 39 0.002 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 38 0.003 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 38 0.003 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 36 0.019 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.043 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.13 At5g13650.2 68418.m01585 elongation factor family protein contai... 32 0.23 At5g13650.1 68418.m01584 elongation factor family protein contai... 32 0.23 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 31 0.40 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 30 0.70 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 30 0.70 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 0.93 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 29 1.2 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 29 1.2 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 29 1.6 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.6 At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 1.6 At5g14460.1 68418.m01692 pseudouridylate synthase TruB family pr... 28 3.7 At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containi... 28 3.7 At5g58410.1 68418.m07314 expressed protein contains similarity t... 27 5.0 At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 27 6.5 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 27 6.5 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 6.5 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 6.5 At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 27 8.7 At3g14080.2 68416.m01780 small nuclear ribonucleoprotein, putati... 27 8.7 At3g14080.1 68416.m01779 small nuclear ribonucleoprotein, putati... 27 8.7 At1g69810.1 68414.m08032 WRKY family transcription factor 27 8.7 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 27 8.7 At1g20160.1 68414.m02521 subtilase family protein similar to sub... 27 8.7 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 130 bits (314), Expect = 5e-31 Identities = 61/75 (81%), Positives = 66/75 (88%) Frame = +3 Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434 K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110 Query: 435 CAVLSVAAGTGEFEA 479 CAVL + + TG FEA Sbjct: 111 CAVLIIDSTTGGFEA 125 Score = 97.1 bits (231), Expect = 5e-21 Identities = 45/51 (88%), Positives = 46/51 (90%) Frame = +1 Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 130 bits (314), Expect = 5e-31 Identities = 61/75 (81%), Positives = 66/75 (88%) Frame = +3 Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434 K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110 Query: 435 CAVLSVAAGTGEFEA 479 CAVL + + TG FEA Sbjct: 111 CAVLIIDSTTGGFEA 125 Score = 97.1 bits (231), Expect = 5e-21 Identities = 45/51 (88%), Positives = 46/51 (90%) Frame = +1 Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 130 bits (314), Expect = 5e-31 Identities = 61/75 (81%), Positives = 66/75 (88%) Frame = +3 Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434 K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110 Query: 435 CAVLSVAAGTGEFEA 479 CAVL + + TG FEA Sbjct: 111 CAVLIIDSTTGGFEA 125 Score = 97.1 bits (231), Expect = 5e-21 Identities = 45/51 (88%), Positives = 46/51 (90%) Frame = +1 Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 130 bits (314), Expect = 5e-31 Identities = 61/75 (81%), Positives = 66/75 (88%) Frame = +3 Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434 K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110 Query: 435 CAVLSVAAGTGEFEA 479 CAVL + + TG FEA Sbjct: 111 CAVLIIDSTTGGFEA 125 Score = 97.1 bits (231), Expect = 5e-21 Identities = 45/51 (88%), Positives = 46/51 (90%) Frame = +1 Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 87.0 bits (206), Expect = 6e-18 Identities = 37/76 (48%), Positives = 54/76 (71%) Frame = +3 Query: 252 GKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQA 431 GKGSF AW LD+ ERERGIT+ +A+ F + +++V ++D+PGH++ + NMI G +QA Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341 Query: 432 DCAVLSVAAGTGEFEA 479 D A+L + A G FEA Sbjct: 342 DAAILVIDASVGAFEA 357 Score = 53.6 bits (123), Expect = 7e-08 Identities = 21/46 (45%), Positives = 34/46 (73%) Frame = +1 Query: 121 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258 + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GK Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGK 283 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 69.7 bits (163), Expect = 9e-13 Identities = 35/89 (39%), Positives = 53/89 (59%) Frame = +3 Query: 210 QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 389 Q Y +E ++ + S+ A+++D + ER +G T+++ FET TI+DAPGH Sbjct: 134 QKYEKEAKD----KSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGH 189 Query: 390 REAIKNMIRGTSQADCAVLSVAAGTGEFE 476 + + NMI G SQAD VL ++A GEFE Sbjct: 190 KSYVPNMISGASQADIGVLVISARKGEFE 218 Score = 59.7 bits (138), Expect = 1e-09 Identities = 23/49 (46%), Positives = 37/49 (75%) Frame = +1 Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 261 +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++ Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 56.8 bits (131), Expect = 7e-09 Identities = 26/62 (41%), Positives = 37/62 (59%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461 +D ER RGITI+ A ++ET + +D PGH + +KNMI G +Q D A+L V+ Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176 Query: 462 TG 467 G Sbjct: 177 DG 178 Score = 39.1 bits (87), Expect = 0.002 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 103 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 237 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 56.8 bits (131), Expect = 7e-09 Identities = 26/62 (41%), Positives = 39/62 (62%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461 +DK E++RGITI A ++ET+K + +D PGH + +KNMI G +Q D +L V+ Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164 Query: 462 TG 467 G Sbjct: 165 DG 166 Score = 32.7 bits (71), Expect = 0.13 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 112 KEKTHINIVVIGHVDSGKSTTT 177 + K H+N+ IGHVD GK+T T Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 38.7 bits (86), Expect = 0.002 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = +3 Query: 282 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLS 449 LD + ERERGITI + + +E + + + +ID PGH + + R + + A+L Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182 Query: 450 VAAGTG 467 V A G Sbjct: 183 VDASQG 188 Score = 28.3 bits (60), Expect = 2.8 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 228 N +I H+D GKST L+ G + R +++ Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 38.3 bits (85), Expect = 0.003 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461 +D + ERE+GITI A Y V IID PGH + + R D A+L + + Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167 Query: 462 TG 467 G Sbjct: 168 GG 169 Score = 27.9 bits (59), Expect = 3.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207 NI + H+DSGK+T T +++ G I Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 38.3 bits (85), Expect = 0.003 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461 +D + ERE+GITI A Y V IID PGH + + R D A+L + + Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167 Query: 462 TG 467 G Sbjct: 168 GG 169 Score = 27.9 bits (59), Expect = 3.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207 NI + H+DSGK+T T +++ G I Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 35.5 bits (78), Expect = 0.019 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRE---AIKNMIRGTSQADCAVLSV 452 +D ++ E+ERGITI A K+ + IID PGH + ++ +R A C SV Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195 Query: 453 A 455 A Sbjct: 196 A 196 Score = 32.7 bits (71), Expect = 0.13 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +1 Query: 118 KTHINIVVIGHVDSGKSTTTGHLIYKCG 201 K + NI ++ H+D+GK+TTT ++Y G Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 34.3 bits (75), Expect = 0.043 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Frame = +3 Query: 237 GGPGNGKGSFKDAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHREAIKNM 410 G +GK S DA + A GIT + + S +T +D PGH + Sbjct: 226 GHVDHGKTSLLDALRNTSVAAREAGGITQHVGAFVVGMPDSGTSITFLDTPGHAAFSEMR 285 Query: 411 IRGTSQADCAVLSVAAGTG 467 RG + D VL VAA G Sbjct: 286 ARGAAVTDIVVLVVAADDG 304 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 32.7 bits (71), Expect = 0.13 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGG 204 NI ++ HVD GK+T HLI GG Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35 Score = 31.9 bits (69), Expect = 0.23 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461 +D L E+ R IT+ + + Y + +ID+PGH + + +D A++ V A Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108 Query: 462 TG 467 G Sbjct: 109 EG 110 >At5g13650.2 68418.m01585 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 676 Score = 31.9 bits (69), Expect = 0.23 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = +3 Query: 279 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458 ++D ERERGITI V IID PGH + + R + D +L V + Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179 Query: 459 GTG 467 G Sbjct: 180 VEG 182 >At5g13650.1 68418.m01584 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 675 Score = 31.9 bits (69), Expect = 0.23 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = +3 Query: 279 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458 ++D ERERGITI V IID PGH + + R + D +L V + Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178 Query: 459 GTG 467 G Sbjct: 179 VEG 181 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 31.1 bits (67), Expect = 0.40 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Frame = +3 Query: 282 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434 LDKL +RERGIT+ E S Y + +ID PGH + + R S Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160 Query: 435 CAVLSVAAGTG 467 A+L V A G Sbjct: 161 GALLVVDAAQG 171 Score = 27.5 bits (58), Expect = 5.0 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 Query: 103 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 213 K EK N +I H+D GKST L+ G I K Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 30.3 bits (65), Expect = 0.70 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 348 TSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458 T + +V+ +D PGH + M+ G + D A+L +AA Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 30.3 bits (65), Expect = 0.70 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 348 TSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458 T + +V+ +D PGH + M+ G + D A+L +AA Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 29.9 bits (64), Expect = 0.93 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +3 Query: 342 FETSKY----YVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458 FE SK +V+ +D PGH + M+ G + D A+L +AA Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 29.5 bits (63), Expect = 1.2 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = +3 Query: 300 ERERGITI-----DIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAGT 464 E+ER I+I + L + Y I+D PGH M AD AVL V A Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244 Query: 465 G 467 G Sbjct: 245 G 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 29.5 bits (63), Expect = 1.2 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = +3 Query: 300 ERERGITI-----DIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAGT 464 E+ER I+I + L + Y I+D PGH M AD AVL V A Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244 Query: 465 G 467 G Sbjct: 245 G 245 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 29.1 bits (62), Expect = 1.6 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +3 Query: 360 YVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458 +V+ +D PGH + M+ G + D A+L +AA Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 29.1 bits (62), Expect = 1.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201 N+ VI HVD GKST T L+ G Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44 >At1g17220.1 68414.m02098 translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris} Length = 1026 Score = 29.1 bits (62), Expect = 1.6 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Frame = +3 Query: 237 GGPGNGKGSFKDAWVLDKLKAERERGITIDIALWKFET----SKYYVTIIDAPGHREAIK 404 G +GK + D K+ A GIT I +K +D PGH Sbjct: 508 GHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGA 567 Query: 405 NMIRGTSQADCAVLSVAAGTG 467 RG D A++ VAA G Sbjct: 568 MRARGARVTDIAIIVVAADDG 588 >At5g14460.1 68418.m01692 pseudouridylate synthase TruB family protein similar to SP|P09171 tRNA pseudouridine synthase B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli O157:H7}; contains Pfam profile PF01509: TruB family pseudouridylate synthase (N terminal domain) Length = 540 Score = 27.9 bits (59), Expect = 3.7 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 222 REVREGGPGNGKGSFKDAWVLDKLKAERERG 314 + + G P + + F D+WV +KL ERE+G Sbjct: 76 KAIESGAPDSAEPEF-DSWVDNKLAMEREQG 105 >At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 1322 Score = 27.9 bits (59), Expect = 3.7 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -3 Query: 443 HSAISLRGSSDHVLDGLSVSRSINDGNI 360 HS ++ SS+++LD + S S DGN+ Sbjct: 433 HSHLTFESSSENLLDAVVASMSNGDGNV 460 >At5g58410.1 68418.m07314 expressed protein contains similarity to hypothetical proteins Length = 1873 Score = 27.5 bits (58), Expect = 5.0 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Frame = -1 Query: 289 LSNTQASLKDPFPFPGPPSRTSRWYVCQY-HHICRSSDQWWW 167 L N SL D R R +VC Y H +C D +W Sbjct: 871 LENRMTSLVDNTLSESKEKRKDRNFVCDYVHAVCSKMDNQFW 912 >At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster) Length = 192 Score = 27.1 bits (57), Expect = 6.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +1 Query: 175 TGHLIYKCGGIDKRTIEKFEKEAQEMGKDP 264 T LIY +D+ I K ++E QE+ KDP Sbjct: 85 TDGLIYVVDSLDRERIGKAKQEFQEIIKDP 114 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 27.1 bits (57), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452 +ID PGH RG+S D A+L V Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 27.1 bits (57), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452 +ID PGH RG+S D A+L V Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 27.1 bits (57), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452 +ID PGH RG+S D A+L V Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732 >At5g25930.1 68418.m03081 leucine-rich repeat family protein / protein kinase family protein contains similarity to Swiss-Prot:P47735 receptor-like protein kinase 5 precursor [Arabidopsis thaliana]; contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain Length = 1005 Score = 26.6 bits (56), Expect = 8.7 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 344 ELPESNIDCDTTLTLSL*FVQYPSIFEGSFPIS-WASFSNFSM 219 E+PES DC T LT+ L + F G FP W + S +S+ Sbjct: 393 EIPESLGDCGTLLTVQL----QNNDFSGKFPSRIWNASSMYSL 431 >At3g14080.2 68416.m01780 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm, Cancer-associated Sm-like) [Homo sapiens] SWISS-PROT:O15116; contains Pfam profile: PF01423 Sm protein Length = 128 Score = 26.6 bits (56), Expect = 8.7 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 252 N+V+IG +D+ + H+I + + + +K E+EA E+ Sbjct: 75 NVVLIGELDTEREELPPHMI-RVSEAEIKRAQKVEREASEL 114 >At3g14080.1 68416.m01779 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclear CaSm, Cancer-associated Sm-like) [Homo sapiens] SWISS-PROT:O15116; contains Pfam profile: PF01423 Sm protein Length = 128 Score = 26.6 bits (56), Expect = 8.7 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +1 Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 252 N+V+IG +D+ + H+I + + + +K E+EA E+ Sbjct: 75 NVVLIGELDTEREELPPHMI-RVSEAEIKRAQKVEREASEL 114 >At1g69810.1 68414.m08032 WRKY family transcription factor Length = 387 Score = 26.6 bits (56), Expect = 8.7 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Frame = -3 Query: 449 AEHSAISLRGSSDHVLDGLSVSRSINDGNI--VLASFELPESNIDCDTTLTLSL*FVQYP 276 A H A ++ + G S S S ++ S + T+TL L YP Sbjct: 267 ASHMAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPTVTLDLTRPNYP 326 Query: 275 SIFEGSFPISWASFS-NFS 222 + +P+S +SFS NFS Sbjct: 327 NQLPDDYPLSSSSFSLNFS 345 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 26.6 bits (56), Expect = 8.7 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 Query: 363 VTIIDAPGHREAIKNMIRGTSQADCAVLSV 452 + +ID PGH RG++ D A+L V Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587 >At1g20160.1 68414.m02521 subtilase family protein similar to subtilisin-type protease precursor GI:14150446 from [Glycine max] Length = 769 Score = 26.6 bits (56), Expect = 8.7 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +3 Query: 345 ETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAGTGE 470 + S+YY T D GH + + I G++ + + VA+GT + Sbjct: 197 DDSEYYTTR-DVIGHGSHVSSTIAGSAVENASYYGVASGTAK 237 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,177,352 Number of Sequences: 28952 Number of extensions: 192430 Number of successful extensions: 661 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 657 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 819227264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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