Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021747X
(481 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 130 5e-31
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 87 6e-18
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 70 9e-13
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 57 7e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 57 7e-09
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 39 0.002
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 38 0.003
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 38 0.003
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 36 0.019
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.043
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.13
At5g13650.2 68418.m01585 elongation factor family protein contai... 32 0.23
At5g13650.1 68418.m01584 elongation factor family protein contai... 32 0.23
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 31 0.40
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 30 0.70
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 30 0.70
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 0.93
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 29 1.2
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 29 1.2
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 29 1.6
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.6
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 1.6
At5g14460.1 68418.m01692 pseudouridylate synthase TruB family pr... 28 3.7
At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containi... 28 3.7
At5g58410.1 68418.m07314 expressed protein contains similarity t... 27 5.0
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 27 6.5
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 27 6.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 6.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 6.5
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 27 8.7
At3g14080.2 68416.m01780 small nuclear ribonucleoprotein, putati... 27 8.7
At3g14080.1 68416.m01779 small nuclear ribonucleoprotein, putati... 27 8.7
At1g69810.1 68414.m08032 WRKY family transcription factor 27 8.7
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 27 8.7
At1g20160.1 68414.m02521 subtilase family protein similar to sub... 27 8.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 130 bits (314), Expect = 5e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +3
Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 435 CAVLSVAAGTGEFEA 479
CAVL + + TG FEA
Sbjct: 111 CAVLIIDSTTGGFEA 125
Score = 97.1 bits (231), Expect = 5e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 130 bits (314), Expect = 5e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +3
Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 435 CAVLSVAAGTGEFEA 479
CAVL + + TG FEA
Sbjct: 111 CAVLIIDSTTGGFEA 125
Score = 97.1 bits (231), Expect = 5e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 130 bits (314), Expect = 5e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +3
Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 435 CAVLSVAAGTGEFEA 479
CAVL + + TG FEA
Sbjct: 111 CAVLIIDSTTGGFEA 125
Score = 97.1 bits (231), Expect = 5e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 130 bits (314), Expect = 5e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +3
Query: 255 KGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
K SFK AWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHR+ IKNMI GTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 435 CAVLSVAAGTGEFEA 479
CAVL + + TG FEA
Sbjct: 111 CAVLIIDSTTGGFEA 125
Score = 97.1 bits (231), Expect = 5e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 87.0 bits (206), Expect = 6e-18
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +3
Query: 252 GKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQA 431
GKGSF AW LD+ ERERGIT+ +A+ F + +++V ++D+PGH++ + NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 432 DCAVLSVAAGTGEFEA 479
D A+L + A G FEA
Sbjct: 342 DAAILVIDASVGAFEA 357
Score = 53.6 bits (123), Expect = 7e-08
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 121 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GK
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGK 283
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 69.7 bits (163), Expect = 9e-13
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +3
Query: 210 QTYHREVREGGPGNGKGSFKDAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 389
Q Y +E ++ + S+ A+++D + ER +G T+++ FET TI+DAPGH
Sbjct: 134 QKYEKEAKD----KSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGH 189
Query: 390 REAIKNMIRGTSQADCAVLSVAAGTGEFE 476
+ + NMI G SQAD VL ++A GEFE
Sbjct: 190 KSYVPNMISGASQADIGVLVISARKGEFE 218
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +1
Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 261
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 56.8 bits (131), Expect = 7e-09
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D ER RGITI+ A ++ET + +D PGH + +KNMI G +Q D A+L V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 462 TG 467
G
Sbjct: 177 DG 178
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 103 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 237
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 56.8 bits (131), Expect = 7e-09
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+DK E++RGITI A ++ET+K + +D PGH + +KNMI G +Q D +L V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 462 TG 467
G
Sbjct: 165 DG 166
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLS 449
LD + ERERGITI + + +E + + + +ID PGH + + R + + A+L
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 450 VAAGTG 467
V A G
Sbjct: 183 VDASQG 188
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 228
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D + ERE+GITI A Y V IID PGH + + R D A+L + +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 462 TG 467
G
Sbjct: 168 GG 169
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D + ERE+GITI A Y V IID PGH + + R D A+L + +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 462 TG 467
G
Sbjct: 168 GG 169
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 35.5 bits (78), Expect = 0.019
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRE---AIKNMIRGTSQADCAVLSV 452
+D ++ E+ERGITI A K+ + IID PGH + ++ +R A C SV
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 453 A 455
A
Sbjct: 196 A 196
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKSTTTGHLIYKCG 201
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 34.3 bits (75), Expect = 0.043
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +3
Query: 237 GGPGNGKGSFKDAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHREAIKNM 410
G +GK S DA + A GIT + + S +T +D PGH +
Sbjct: 226 GHVDHGKTSLLDALRNTSVAAREAGGITQHVGAFVVGMPDSGTSITFLDTPGHAAFSEMR 285
Query: 411 IRGTSQADCAVLSVAAGTG 467
RG + D VL VAA G
Sbjct: 286 ARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGG 204
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 31.9 bits (69), Expect = 0.23
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAG 461
+D L E+ R IT+ + + Y + +ID+PGH + + +D A++ V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 462 TG 467
G
Sbjct: 109 EG 110
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 279 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
++D ERERGITI V IID PGH + + R + D +L V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 459 GTG 467
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 279 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
++D ERERGITI V IID PGH + + R + D +L V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 459 GTG 467
G
Sbjct: 179 VEG 181
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 31.1 bits (67), Expect = 0.40
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = +3
Query: 282 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHREAIKNMIRGTSQAD 434
LDKL +RERGIT+ E S Y + +ID PGH + + R S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 435 CAVLSVAAGTG 467
A+L V A G
Sbjct: 161 GALLVVDAAQG 171
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 103 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 213
K EK N +I H+D GKST L+ G I K
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 30.3 bits (65), Expect = 0.70
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 348 TSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
T + +V+ +D PGH + M+ G + D A+L +AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 30.3 bits (65), Expect = 0.70
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 348 TSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
T + +V+ +D PGH + M+ G + D A+L +AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 29.9 bits (64), Expect = 0.93
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +3
Query: 342 FETSKY----YVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
FE SK +V+ +D PGH + M+ G + D A+L +AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +3
Query: 300 ERERGITI-----DIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAGT 464
E+ER I+I + L + Y I+D PGH M AD AVL V A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 465 G 467
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +3
Query: 300 ERERGITI-----DIALWKFETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAGT 464
E+ER I+I + L + Y I+D PGH M AD AVL V A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 465 G 467
G
Sbjct: 245 G 245
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 360 YVTIIDAPGHREAIKNMIRGTSQADCAVLSVAA 458
+V+ +D PGH + M+ G + D A+L +AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 1.6
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Frame = +3
Query: 237 GGPGNGKGSFKDAWVLDKLKAERERGITIDIALWKFET----SKYYVTIIDAPGHREAIK 404
G +GK + D K+ A GIT I +K +D PGH
Sbjct: 508 GHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGA 567
Query: 405 NMIRGTSQADCAVLSVAAGTG 467
RG D A++ VAA G
Sbjct: 568 MRARGARVTDIAIIVVAADDG 588
>At5g14460.1 68418.m01692 pseudouridylate synthase TruB family
protein similar to SP|P09171 tRNA pseudouridine synthase
B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase)
(Pseudouridylate synthase) (Uracil hydrolyase)
{Escherichia coli O157:H7}; contains Pfam profile
PF01509: TruB family pseudouridylate synthase (N
terminal domain)
Length = 540
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 222 REVREGGPGNGKGSFKDAWVLDKLKAERERG 314
+ + G P + + F D+WV +KL ERE+G
Sbjct: 76 KAIESGAPDSAEPEF-DSWVDNKLAMEREQG 105
>At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1322
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 443 HSAISLRGSSDHVLDGLSVSRSINDGNI 360
HS ++ SS+++LD + S S DGN+
Sbjct: 433 HSHLTFESSSENLLDAVVASMSNGDGNV 460
>At5g58410.1 68418.m07314 expressed protein contains similarity to
hypothetical proteins
Length = 1873
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 289 LSNTQASLKDPFPFPGPPSRTSRWYVCQY-HHICRSSDQWWW 167
L N SL D R R +VC Y H +C D +W
Sbjct: 871 LENRMTSLVDNTLSESKEKRKDRNFVCDYVHAVCSKMDNQFW 912
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 175 TGHLIYKCGGIDKRTIEKFEKEAQEMGKDP 264
T LIY +D+ I K ++E QE+ KDP
Sbjct: 85 TDGLIYVVDSLDRERIGKAKQEFQEIIKDP 114
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452
+ID PGH RG+S D A+L V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452
+ID PGH RG+S D A+L V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 369 IIDAPGHREAIKNMIRGTSQADCAVLSV 452
+ID PGH RG+S D A+L V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 344 ELPESNIDCDTTLTLSL*FVQYPSIFEGSFPIS-WASFSNFSM 219
E+PES DC T LT+ L + F G FP W + S +S+
Sbjct: 393 EIPESLGDCGTLLTVQL----QNNDFSGKFPSRIWNASSMYSL 431
>At3g14080.2 68416.m01780 small nuclear ribonucleoprotein, putative
/ snRNP, putative / Sm protein, putative similar to U6
snRNA-associated Sm-like protein LSm1 (Small nuclear
ribonuclear CaSm, Cancer-associated Sm-like) [Homo
sapiens] SWISS-PROT:O15116; contains Pfam profile:
PF01423 Sm protein
Length = 128
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 252
N+V+IG +D+ + H+I + + + +K E+EA E+
Sbjct: 75 NVVLIGELDTEREELPPHMI-RVSEAEIKRAQKVEREASEL 114
>At3g14080.1 68416.m01779 small nuclear ribonucleoprotein, putative
/ snRNP, putative / Sm protein, putative similar to U6
snRNA-associated Sm-like protein LSm1 (Small nuclear
ribonuclear CaSm, Cancer-associated Sm-like) [Homo
sapiens] SWISS-PROT:O15116; contains Pfam profile:
PF01423 Sm protein
Length = 128
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 252
N+V+IG +D+ + H+I + + + +K E+EA E+
Sbjct: 75 NVVLIGELDTEREELPPHMI-RVSEAEIKRAQKVEREASEL 114
>At1g69810.1 68414.m08032 WRKY family transcription factor
Length = 387
Score = 26.6 bits (56), Expect = 8.7
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -3
Query: 449 AEHSAISLRGSSDHVLDGLSVSRSINDGNI--VLASFELPESNIDCDTTLTLSL*FVQYP 276
A H A ++ + G S S S ++ S + T+TL L YP
Sbjct: 267 ASHMAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPTVTLDLTRPNYP 326
Query: 275 SIFEGSFPISWASFS-NFS 222
+ +P+S +SFS NFS
Sbjct: 327 NQLPDDYPLSSSSFSLNFS 345
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 363 VTIIDAPGHREAIKNMIRGTSQADCAVLSV 452
+ +ID PGH RG++ D A+L V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g20160.1 68414.m02521 subtilase family protein similar to
subtilisin-type protease precursor GI:14150446 from
[Glycine max]
Length = 769
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 345 ETSKYYVTIIDAPGHREAIKNMIRGTSQADCAVLSVAAGTGE 470
+ S+YY T D GH + + I G++ + + VA+GT +
Sbjct: 197 DDSEYYTTR-DVIGHGSHVSSTIAGSAVENASYYGVASGTAK 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,177,352
Number of Sequences: 28952
Number of extensions: 192430
Number of successful extensions: 661
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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