Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021746
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 252 FFWHVLRPFAFACESVF 202
           +FW VL+   F C S +
Sbjct: 138 YFWFVLKQVMFLCYSTY 154


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 267 STISAFFWHVLRPFAFACESVFSPDL 190
           S +++F WH+    +F   +   PDL
Sbjct: 237 SKLNSFHWHITDSHSFPFTAESLPDL 262


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 688 YPRHHHPHQILLHL 647
           +P+HH PH    H+
Sbjct: 175 HPQHHQPHHQQQHM 188


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 688 YPRHHHPHQILLHL 647
           +P+HH PH    H+
Sbjct: 177 HPQHHQPHHQQQHM 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,694
Number of Sequences: 336
Number of extensions: 1157
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)