Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021746
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF286471-1|AAG00550.1|  316|Homo sapiens retinitis pigmentosa GT...    31   4.3  
BC131489-1|AAI31490.1|  604|Homo sapiens USP35 protein protein.        30   7.5  
AJ586137-1|CAE51937.1| 1017|Homo sapiens ubiquitin-specific prot...    30   7.5  
AB037793-1|BAA92610.1|  773|Homo sapiens KIAA1372 protein protein.     30   7.5  
BC104806-1|AAI04807.1|  866|Homo sapiens NMDA receptor regulated...    30   9.9  
BC093928-1|AAH93928.1|  866|Homo sapiens NMDA receptor regulated...    30   9.9  
AY112670-1|AAM48746.1|  866|Homo sapiens transcriptional coactiv...    30   9.9  
AY039242-1|AAK68661.1|  866|Homo sapiens gastric cancer antigen ...    30   9.9  
AJ314788-1|CAC43228.1|  866|Homo sapiens putative N-acetyltransf...    30   9.9  
AF327722-1|AAK15707.1|  866|Homo sapiens putative acetyltransfer...    30   9.9  
AC097376-2|AAY40950.1|  866|Homo sapiens unknown protein.              30   9.9  

>AF286471-1|AAG00550.1|  316|Homo sapiens retinitis pigmentosa
           GTPase regulator protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 212 SQAKAKGRKTCQKKAEIVEKRKAIKQGKRN--EAKEIETNDEDIK 340
           S++ AK    C + +EI E+++  +  K N  E +E+E N+E++K
Sbjct: 251 SKSMAKYDFKCDRLSEIPEEKEGAEDSKGNGIEEQEVEANEENVK 295


>BC131489-1|AAI31490.1|  604|Homo sapiens USP35 protein protein.
          Length = 604

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/64 (20%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 RSGEKTDSQAKAKGRKTCQKKAEIVEKRKAIK-QGKRNEAKEIETNDEDIKKPVVKGFSD 367
           +S ++   + + +G++   +K E+ E+ ++ + +G+R + +E+E  +E ++K   K    
Sbjct: 256 QSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQ 315

Query: 368 DNKE 379
           + +E
Sbjct: 316 EKEE 319


>AJ586137-1|CAE51937.1| 1017|Homo sapiens ubiquitin-specific
           proteinase 35 protein.
          Length = 1017

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/64 (20%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 RSGEKTDSQAKAKGRKTCQKKAEIVEKRKAIK-QGKRNEAKEIETNDEDIKKPVVKGFSD 367
           +S ++   + + +G++   +K E+ E+ ++ + +G+R + +E+E  +E ++K   K    
Sbjct: 669 QSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQ 728

Query: 368 DNKE 379
           + +E
Sbjct: 729 EKEE 732


>AB037793-1|BAA92610.1|  773|Homo sapiens KIAA1372 protein protein.
          Length = 773

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/64 (20%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 RSGEKTDSQAKAKGRKTCQKKAEIVEKRKAIK-QGKRNEAKEIETNDEDIKKPVVKGFSD 367
           +S ++   + + +G++   +K E+ E+ ++ + +G+R + +E+E  +E ++K   K    
Sbjct: 425 QSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQ 484

Query: 368 DNKE 379
           + +E
Sbjct: 485 EKEE 488


>BC104806-1|AAI04807.1|  866|Homo sapiens NMDA receptor regulated 1
           protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


>BC093928-1|AAH93928.1|  866|Homo sapiens NMDA receptor regulated 1
           protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


>AY112670-1|AAM48746.1|  866|Homo sapiens transcriptional
           coactivator tubedown-100 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


>AY039242-1|AAK68661.1|  866|Homo sapiens gastric cancer antigen
           Ga19 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


>AJ314788-1|CAC43228.1|  866|Homo sapiens putative
           N-acetyltransferase protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


>AF327722-1|AAK15707.1|  866|Homo sapiens putative acetyltransferase
           protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


>AC097376-2|AAY40950.1|  866|Homo sapiens unknown protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +2

Query: 233 RKTCQKKAEIVEKRKAIKQGK--RNEAKEIETNDEDIKKP 346
           ++  QKKA+I E++K  ++ K  RN+ K+ + +DE+I  P
Sbjct: 599 QRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIGGP 638


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,634,935
Number of Sequences: 237096
Number of extensions: 660161
Number of successful extensions: 2367
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2366
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)