Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021744
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical p...    48   9e-06
AL032631-7|CAB63337.2|  855|Caenorhabditis elegans Hypothetical ...    30   2.0  
U64598-3|AAK39213.1|  432|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical
           protein W02B12.8a protein.
          Length = 444

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 536 DRLGRPVVVFIGKWFPIG-DIDXXXXXXXXXXXXDPIVRGDYVIAYFHTLASSANHPPFS 712
           DR+GRP+VV      P   +ID            D IV  DY I YFH    S N PP  
Sbjct: 89  DRVGRPIVVVYAYRLPSSKEIDHARLLQYLVQIIDKIVDQDYTIVYFHYGLRSHNKPPVR 148

Query: 713 WLKEVYTVL 739
           WL + Y  L
Sbjct: 149 WLFQAYKQL 157


>AL032631-7|CAB63337.2|  855|Caenorhabditis elegans Hypothetical
           protein Y106G6H.5 protein.
          Length = 855

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 741 GSTVYTSLSHEKGGWFAD 688
           G+TVYT + H+KGG+  D
Sbjct: 545 GTTVYTGMQHQKGGYVTD 562


>U64598-3|AAK39213.1|  432|Caenorhabditis elegans Hypothetical
           protein C52B9.3a protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 635 DPIVRGDYVIAYFHTLASSANHPPFSWLKEVYTVLP 742
           +P++  +  ++  HT+  +  H PF  L+   +VLP
Sbjct: 109 NPVIDHELPVSTLHTIILNGTHLPFKTLQSFLSVLP 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,447,842
Number of Sequences: 27780
Number of extensions: 264898
Number of successful extensions: 591
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)