Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021742
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060741-1|AAL28289.1|  287|Drosophila melanogaster GH19142p pro...    32   0.66 
AE014134-3076|AAN11033.1|  287|Drosophila melanogaster CG17549-P...    32   0.66 
AE014134-3075|AAF53789.2|  262|Drosophila melanogaster CG17549-P...    32   0.66 
AE014134-3074|AAF53788.1|  262|Drosophila melanogaster CG17549-P...    32   0.66 
AY131211-1|AAM97280.1|  608|Drosophila melanogaster scaffold pro...    30   2.7  
AE014297-3264|AAF56090.3|  608|Drosophila melanogaster CG33193-P...    30   2.7  
AY075208-1|AAL68076.1|  736|Drosophila melanogaster AT14535p pro...    29   6.2  
AY069854-1|AAL39999.1|  607|Drosophila melanogaster SD10307p pro...    29   6.2  
AE014296-2890|AAF49355.4|  736|Drosophila melanogaster CG16793-P...    29   6.2  

>AY060741-1|AAL28289.1|  287|Drosophila melanogaster GH19142p
           protein.
          Length = 287

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 211 IGPANPERPNVTGRF-SQICSGTSFVSGASEWSPGTTGKSGKPLSV 77
           I P+NP  PN+  RF      G+SF S +S    G +G   K +SV
Sbjct: 209 ISPSNPASPNIVNRFGGGSGGGSSFSSSSSSGGGGGSGGGYKGVSV 254


>AE014134-3076|AAN11033.1|  287|Drosophila melanogaster CG17549-PA,
           isoform A protein.
          Length = 287

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 211 IGPANPERPNVTGRF-SQICSGTSFVSGASEWSPGTTGKSGKPLSV 77
           I P+NP  PN+  RF      G+SF S +S    G +G   K +SV
Sbjct: 209 ISPSNPASPNIVNRFGGGSGGGSSFSSSSSSGGGGGSGGGYKGVSV 254


>AE014134-3075|AAF53789.2|  262|Drosophila melanogaster CG17549-PC,
           isoform C protein.
          Length = 262

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 211 IGPANPERPNVTGRF-SQICSGTSFVSGASEWSPGTTGKSGKPLSV 77
           I P+NP  PN+  RF      G+SF S +S    G +G   K +SV
Sbjct: 184 ISPSNPASPNIVNRFGGGSGGGSSFSSSSSSGGGGGSGGGYKGVSV 229


>AE014134-3074|AAF53788.1|  262|Drosophila melanogaster CG17549-PB,
           isoform B protein.
          Length = 262

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 211 IGPANPERPNVTGRF-SQICSGTSFVSGASEWSPGTTGKSGKPLSV 77
           I P+NP  PN+  RF      G+SF S +S    G +G   K +SV
Sbjct: 184 ISPSNPASPNIVNRFGGGSGGGSSFSSSSSSGGGGGSGGGYKGVSV 229


>AY131211-1|AAM97280.1|  608|Drosophila melanogaster scaffold
           protein salvador protein.
          Length = 608

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 419 HTSPAHSLPHCSGTGRCPSPVAHRHGWRRQTEQAKRNGGGYFMMERVTCQRR 574
           H+ P HSLPH S       P    H +R  + Q  +N   Y   E++   RR
Sbjct: 109 HSHP-HSLPHPSHPHVRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRR 159


>AE014297-3264|AAF56090.3|  608|Drosophila melanogaster CG33193-PA
           protein.
          Length = 608

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 419 HTSPAHSLPHCSGTGRCPSPVAHRHGWRRQTEQAKRNGGGYFMMERVTCQRR 574
           H+ P HSLPH S       P    H +R  + Q  +N   Y   E++   RR
Sbjct: 109 HSHP-HSLPHPSHPHVRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRR 159


>AY075208-1|AAL68076.1|  736|Drosophila melanogaster AT14535p
           protein.
          Length = 736

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 105 VVPGDHSDAPETNDVPEHIWLNLPVTFGLS 194
           V+  DH++   TN++    W N  VTFGLS
Sbjct: 144 VLQEDHTNYYNTNNMQRLFWDNTSVTFGLS 173


>AY069854-1|AAL39999.1|  607|Drosophila melanogaster SD10307p
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 419 HTSPAHSLPHCSGTGRCPSPVAHRHGWRRQTEQAKRNGGGYFMMERVTCQRR 574
           H+ P HSLPH +       P    H +R  + Q  +N   Y   E++   RR
Sbjct: 109 HSHP-HSLPHPAHPHVRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRR 159


>AE014296-2890|AAF49355.4|  736|Drosophila melanogaster CG16793-PA
           protein.
          Length = 736

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 105 VVPGDHSDAPETNDVPEHIWLNLPVTFGLS 194
           V+  DH++   TN++    W N  VTFGLS
Sbjct: 144 VLQEDHTNYYNTNNMQRLFWDNTSVTFGLS 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,620,165
Number of Sequences: 53049
Number of extensions: 875923
Number of successful extensions: 2529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2529
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)