Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021742
(709 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 0.53
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 0.53
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.93
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.93
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.7
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 22 6.6
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 6.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 6.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.7
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 48 RTAQLAVICRTDNGLPDFPVVPGDHSD-APETNDV 149
R ++A +T P P VPGDH D AP+ +V
Sbjct: 317 RFQKIAESMKTARENPGPPGVPGDHGDHAPKQTEV 351
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 48 RTAQLAVICRTDNGLPDFPVVPGDHSD-APETNDV 149
R ++A +T P P VPGDH D AP+ +V
Sbjct: 317 RFQKIAESMKTARENPGPPGVPGDHGDHAPKQTEV 351
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 0.93
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 400 PPALRISYITSAFSSTLFGNWSVSQPSCAS 489
PP+ + Y+TS+ SS++ +W AS
Sbjct: 1404 PPSAPVLYVTSSTSSSILLHWKSGHNGGAS 1433
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 0.93
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 400 PPALRISYITSAFSSTLFGNWSVSQPSCAS 489
PP+ + Y+TS+ SS++ +W AS
Sbjct: 1400 PPSAPVLYVTSSTSSSILLHWKSGHNGGAS 1429
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 356 QSTDKYDLFYGH 321
Q TDKYD +YG+
Sbjct: 424 QETDKYDAYYGN 435
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 48 RTAQLAVICRTDNGLPDFPVVPGDHSD-APE 137
R ++A +T P P VPGDH D AP+
Sbjct: 256 RFQKIAESMKTARENPGPPGVPGDHGDHAPK 286
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 534 PPLRLACSVCRRQPWRCATGLGHRPVPEQCGRECAGDV*NSQSRR 400
P RLA + +R + G RPVPE+ R D+ S S R
Sbjct: 1340 PVPRLAQDSSEDESYRGPSASGGRPVPERPERVPTVDLSPSPSDR 1384
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 435 ILFHTVRELVGVPAQLRIATVGVDRP 512
+LF T+ L+ V AQ I+ DRP
Sbjct: 6 LLFFTILALINVKAQDDISKFLKDRP 31
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 99 FPVVPGDHSDAPETNDVPEHIWLNL 173
FP PG+ P TN + ++LN+
Sbjct: 107 FPGFPGEEMWNPNTNISEDCLYLNI 131
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -1
Query: 208 GPANPERPNVTGRFSQICSGTSFVSGAS 125
G A+P PN + ++ C+ T+ ++ S
Sbjct: 734 GEASPRSPNASPSPAEQCASTTTITARS 761
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 99 FPVVPGDHSDAPETNDVPEHIWLNL 173
FP PG+ P TN + ++LN+
Sbjct: 107 FPGFPGEEMWNPNTNISEDCLYLNI 131
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 440 LPHCSGTGRCPSP 478
L HC+ RCP P
Sbjct: 1692 LNHCAPNRRCPPP 1704
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,039
Number of Sequences: 438
Number of extensions: 5328
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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