Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021741
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.82 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.82 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 420 SFIYVHFIFSICITLFNY 367
           +F++V   FSICIT F Y
Sbjct: 236 NFLFVLSTFSICITQFYY 253


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 417 FIYVHFIFSICITLFNYRMLFL 352
           F  +H +F +C+  F   +LFL
Sbjct: 188 FFNMHLLFLLCLDYFTLHLLFL 209



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 417 FIYVHFIFSICITLFNYRMLFL 352
           F Y+H +F     +F   +LFL
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFL 282


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 381 TLFNYRMLFLSXRCNRRLYVQNIAAASWTTIR 286
           +LF + ++FLS RC +     N  A  W  I+
Sbjct: 144 SLFIFDLIFLSFRCTKLCKEANKTAFLWYHIK 175


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 698 IFIHCT*FIILNAWCSFNFTYTTICW*NGRTDRLIRR 588
           IFI C  F ++  W SF   +   C  N  T R + R
Sbjct: 132 IFITCELFFVILLWISFFLNFMLHC--NNTTWRCLYR 166


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = -3

Query: 420 SFIYVHFIFSICITLFN----YRMLFLSXRCNRRLYVQNIAAASWTTI 289
           SF+Y H I    + LFN    Y+ L ++     +L +  +     TT+
Sbjct: 352 SFVYYHRILGETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTVLKTTM 399


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = -1

Query: 314 SLLLVGPPFAASSSGSVVTSH--LLNYCQANHR*YRQPGYPGYRLEATLPRHRENRCE 147
           S + VG     +S+ S+   H   +N     HR   QPG+ G      +   + N CE
Sbjct: 21  SCIAVGVGSGRNSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVNPCE 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,109
Number of Sequences: 336
Number of extensions: 2808
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)