Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021741
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 33 0.23
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 32 0.53
03_06_0138 + 31940606-31940708,31940792-31940897,31941739-319418... 31 0.70
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 31 0.93
03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178 31 1.2
03_06_0146 - 31976538-31978643,31978653-31978751 30 1.6
03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098 29 2.8
12_02_0885 + 23994354-23994584,23994987-23995342,23995549-239956... 29 3.7
05_05_0022 + 21592403-21593083,21593720-21594208 29 3.7
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 29 3.7
01_04_0126 + 16397069-16397842 29 3.7
07_01_0731 - 5566878-5567513 29 4.9
09_04_0668 + 19325747-19325785,19325825-19325881,19326361-193264... 28 6.5
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 28 6.5
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245... 28 6.5
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 28 6.5
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 28 6.5
10_05_0019 - 8049145-8049334,8059808-8060618,8060708-8060783,806... 28 8.6
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266... 28 8.6
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 8.6
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 28 8.6
04_04_0799 + 28143878-28145042,28145127-28145290,28146008-281460... 28 8.6
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 265 TEPEELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNAD-AEDEMDIDETASGAMNE 441
TE E+ G S + +DVE + +EE + + D ED+ D + +GA E
Sbjct: 58 TEAEDAKEEGASESEGEAMDVEAKESADEKEEEEAEAEADGDEGEDKSDEMDAEAGAAEE 117
Query: 442 ES 447
E+
Sbjct: 118 EA 119
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -1
Query: 350 AXGAIEGSTSKTSLLLVGPPFAASSSGSVVTSHLLNYCQANHR 222
A G ++G +S SLLL AAS SH++ Y QA HR
Sbjct: 327 ATGNLDGISSPASLLLPSAA-AASPDSPEFRSHVIKYLQARHR 368
>03_06_0138 +
31940606-31940708,31940792-31940897,31941739-31941838,
31942913-31942958,31943580-31943689
Length = 154
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 259 VTTEPEELAANGGPTSSSDVLDVEPSIAPXAQEEHPV-VEQGNADAEDEMDIDE 417
V E E AA+ P + D LDV ++ EHP +EQ + +E+ + +DE
Sbjct: 11 VVHERPERAAHPHPADAIDALDVFDTVRDIKDPEHPYSLEQLSVLSEESVSVDE 64
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 31.1 bits (67), Expect = 0.93
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 259 VTTEPEELAANGGPTSSSDVLDVEPSIAPXAQEEHP----VVEQGNADAEDEMDIDETAS 426
V EP+++ G + D EP A ++E P + E+ DA+ E ++E A
Sbjct: 117 VEEEPKDVMETGEEAIEPEE-DEEPEEAEVEEDEEPEELEMEEEEPEDADSEESMEEEAG 175
Query: 427 GAMNEESAYIGDNCLSTPADTEE 495
++EE A D D+EE
Sbjct: 176 SEVSEEEAAADDMKEIADKDSEE 198
>03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178
Length = 1122
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 LTAILTMARKCR-LKPITRITRLPILSMICLTIIQQVR 257
L I+ + C+ L P+ + RL ILSM C+T ++ VR
Sbjct: 819 LAKIILCQQSCKFLPPLGELPRLRILSMECMTDVEHVR 856
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 510 DQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTM 689
+ D+ D+ + ES+ E + D EE D+S+ I D +G G D ESS
Sbjct: 226 ESDSDEDTESTDEESDYEEEIDD-EEIDDESVEEDINLDDELMGFASGLFGDDDTESSHD 284
Query: 690 DEDI 701
+ED+
Sbjct: 285 EEDL 288
>03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098
Length = 221
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/86 (24%), Positives = 35/86 (40%)
Frame = +1
Query: 259 VTTEPEELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAMN 438
V T EL ++ P D E + +++ PVVE D +DE D D+ +
Sbjct: 9 VATAEAELESSAAPPVKPD----EAAAKAQPEDDAPVVEDAKDDDDDEEDDDDDEDEDED 64
Query: 439 EESAYIGDNCLSTPADTEENSPQMIK 516
E IG+ +++ M+K
Sbjct: 65 GEQGAIGNEGSKQSRSEKKSRKAMMK 90
>12_02_0885 +
23994354-23994584,23994987-23995342,23995549-23995663,
23995918-23995962,23996151-23996333,23996802-23996978,
23997345-23997476,23997587-23997766,23999116-23999247,
24000212-24000280,24000377-24000490,24000579-24000806,
24001343-24001486
Length = 701
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +3
Query: 504 PNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESS 683
P Q+N+ +E E EG D E SP Q + D +VE ++ D+E
Sbjct: 596 PRRQENEYSESEREESEYETEG-EDIEHSPTQGREDELDEEDEYEEDVEEEAAMSDEEIE 654
Query: 684 TMDEDIAEGGVAS 722
GG ++
Sbjct: 655 EPKRRRESGGASA 667
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +3
Query: 504 PNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESS 683
P D D+ +M P EE D D +I LP +G G E AP +D+E
Sbjct: 75 PVDADDG-GAMNNPPVKEEVSNTTDDYAGVDLNIG---LPATTGGGSSEDAPMDEDEEDD 130
Query: 684 TMDED 698
DE+
Sbjct: 131 DDDEE 135
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 262 TTEPEELAANGGPTSSSDVLDVEPSIAPXAQEE--HPVVEQGNADAEDEM 405
TTE L A P+SS+D L ++ P ++ PV ++G+ D D +
Sbjct: 810 TTETVNLKATDNPSSSNDGLTQVRTLLPDLNQQVAAPVSDEGHTDIVDHL 859
>01_04_0126 + 16397069-16397842
Length = 257
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 534 MIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSV 665
+I P+ +E G G+A D S+++ ++P G + AP++
Sbjct: 9 LIDMPQPQETNGDGEAAPEADISMATTLMPNGVGERKATAAPAL 52
>07_01_0731 - 5566878-5567513
Length = 211
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 501 APNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDES 680
A D+ + +E E E E A++ D + ++ D GV E +G V DD+
Sbjct: 45 AAEDEAEPYEVEFEEEEEEPQEVEFAADDDSDDDVGGDLVD-DGGVMEEDGLDYVYDDDD 103
Query: 681 -STMDEDIAEG 710
+D D +G
Sbjct: 104 VELVDADFEDG 114
>09_04_0668 +
19325747-19325785,19325825-19325881,19326361-19326490,
19328303-19328352,19328645-19328741,19328834-19328902,
19328986-19329078,19329194-19329317,19329904-19329973,
19330046-19330087,19330245-19330373,19330468-19330575,
19330729-19330771,19330840-19330878,19331076-19331200,
19331397-19331409,19331504-19331574,19331849-19331936,
19332515-19332600,19332708-19332762,19332859-19333028,
19333157-19333273,19333392-19333453,19333734-19333793,
19333855-19333921
Length = 667
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +3
Query: 507 NDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESST 686
N+ +++ D+M + ES++ D E P ++ + P D G S D +
Sbjct: 311 NNVNSEDDNMSLDNESDQDNDFSDTEVRPSEAERYIVAPNDGTCKGQNGTISEDDTQDPV 370
Query: 687 MDEDI 701
+E++
Sbjct: 371 HEEEL 375
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 534 MIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDEDI 701
++ E EE EG E DQ++ + P + V SVQ+D++ D +I
Sbjct: 300 LMDRTEEEEEEGEAYLEVPLDQAMEMEVHPDQANEEAVMEEVSVQEDDAQEADMEI 355
>02_05_0258 +
27222058-27223198,27223297-27223460,27224399-27224575,
27224713-27224761,27224991-27225793
Length = 777
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 256 DVTTEPEELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQG 381
+V++E + G + S + V SIA +EE+PVV++G
Sbjct: 269 EVSSEYSAHGSGGARSRRSSIGGVSSSIAEVDEEENPVVDKG 310
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +1
Query: 265 TEPE---ELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAM 435
T+PE +L A+ +SS + V + AP ++ +DE D E A M
Sbjct: 1448 TQPEKKRDLVASDVSSSSQSLTTVTEANAPNEVASMVTEANDSSSNDDERDAGEDAQEQM 1507
Query: 436 NEESAYIGDNCLSTPADTEEN 498
+ G+N S+P+++E+N
Sbjct: 1508 SSG----GENEKSSPSESEKN 1524
>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 507 NDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESST 686
+D D+ LDS + + +E+ GD ++ D+ LP + E E QD+ SS+
Sbjct: 1703 DDDDDSLDSSSSDDDDDES---GDEDDGSDE------LPAEMESSEEEDGSDGQDESSSS 1753
Query: 687 M 689
M
Sbjct: 1754 M 1754
>10_05_0019 -
8049145-8049334,8059808-8060618,8060708-8060783,
8060856-8061008
Length = 409
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 349 AQEEHPVVEQ-GNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSP 504
A +E V E+ GN + E+E E A + + + + +NC+ TP T SP
Sbjct: 160 ADDEDDVKERDGNEEGEEE----EKAEAVVEKAADEVVENCVDTPGYTPTPSP 208
>07_01_0362 -
2667031-2667090,2667182-2667426,2667749-2669471,
2669578-2669921,2670544-2670667,2671350-2671599,
2672486-2672571
Length = 943
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 567 GLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESST 686
G+G + E+ + + TDS VG+VE AP + ++ +T
Sbjct: 695 GMGASHEAEIHGVDVSEHKTDSVVGDVEPAPELTENMGNT 734
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 262 TTEPEELAANGGP---TSSSDVLDVEPSIAPXAQEEHPVVEQGNADA---EDEMDIDETA 423
T P+EL G T +S + VEP ++E P E+ + ED+ ++DE A
Sbjct: 1170 TAPPKELIKEGEENMNTDNSAAVHVEPVADEKMEDEEPDYEEDPEEVELYEDDEEMDEAA 1229
Query: 424 SGAMNEES 447
+ + E++
Sbjct: 1230 AEELVEQN 1237
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 DVTTEPEELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAM 435
D +E E+L+ + + +VE QEE E+G + E+E +++ A G
Sbjct: 12 DDDSEEEQLSPSSSAGEEEEE-EVEEEEGEEQQEEQGEEEEGFSGDEEEQEVEGEADGEQ 70
Query: 436 ----NEESAYIGDNCLSTPADTEE 495
EE + +G+ + EE
Sbjct: 71 VEEEEEEESSVGEEEAEAEGEEEE 94
>04_04_0799 +
28143878-28145042,28145127-28145290,28146008-28146070,
28146268-28146491,28146850-28147555
Length = 773
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 606 SSAILPTDSG--VGEVEGAPSVQDDESSTMDEDIAEGGVAS 722
++A P+ S V E EG P +++DE + +++A GG ++
Sbjct: 246 AAAYTPSRSSREVREEEGIPELEEDEDDCVFKEVASGGYSA 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,816
Number of Sequences: 37544
Number of extensions: 312884
Number of successful extensions: 1220
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -