BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021741
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 33 0.27
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 33 0.27
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 33 0.27
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 33 0.27
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 31 0.63
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 0.63
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69646-6|CAD44142.1| 287|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69646-5|CAA93474.1| 288|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 30 1.5
AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical ... 30 1.5
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 2.5
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 2.5
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 29 2.5
Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 29 4.4
Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 5.9
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 28 7.8
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 28 7.8
>Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical
protein T24B8.3b protein.
Length = 104
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 513 QDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMD 692
++ + + K+ E EE GD E++ D+ + DS GE EG+ + + +E S D
Sbjct: 37 EEEPAEKVTKDAEGEEE---GDDEDADDEE--DEVNDEDSSEGEGEGSDAGEGEEGSGDD 91
Query: 693 ED--IAEGGVAS 722
ED AEGG S
Sbjct: 92 EDGEEAEGGEES 103
>Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical
protein T24B8.3a protein.
Length = 105
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 549 ESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDED--IAEGGVAS 722
E E E GD E++ D+ + DS GE EG+ + + +E S DED AEGG S
Sbjct: 47 EDAEGEEEGDDEDADDEE--DEVNDEDSSEGEGEGSDAGEGEEGSGDDEDGEEAEGGEES 104
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 519 NQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDED 698
+QLD ++E + +E + L E+P+ ++ P G G GAP DD++S D+D
Sbjct: 498 HQLDQFLREGKLDEEDELN---ETPEVVGEDSVSPRSGGSGGT-GAPEEVDDDTSDDDDD 553
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 519 NQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDED 698
+QLD ++E + +E + L E+P+ ++ P G G GAP DD++S D+D
Sbjct: 500 HQLDQFLREGKLDEEDELN---ETPEVVGEDSVSPRSGGSGGT-GAPEEVDDDTSDDDDD 555
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 519 NQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDED 698
+QLD ++E + +E + L E+P+ ++ P G G GAP DD++S D+D
Sbjct: 500 HQLDQFLREGKLDEEDELN---ETPEVVGEDSVSPRSGGSGGT-GAPEEVDDDTSDDDDD 555
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 519 NQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDED 698
+QLD ++E + +E + L E+P+ ++ P G G GAP DD++S D+D
Sbjct: 500 HQLDQFLREGKLDEEDELN---ETPEVVGEDSVSPRSGGSGGT-GAPEEVDDDTSDDDDD 555
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 510 DQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEV 647
++D D +SEE E G ++P + +S+ TD +GE+
Sbjct: 219 EEDEDSDDSDDSDDSEEEEAEGSTAQAPAEKANSSTTTTDQNIGEL 264
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +1
Query: 256 DVTTEPEELAANGGP---TSSSDVLDVEPSIAPXAQEEHPVVE-QGNADAEDEMDIDETA 423
D + + EE+ G S + LD S A E E +G+ D+EDE ++ET
Sbjct: 137 DESEDEEEVPKETGTYAFESKPEALDDSESEASDVSESKDESESEGSDDSEDEEYVEETC 196
Query: 424 SGAMN--EESAYIGDNCLSTPADTEENS 501
+ A+N E + D + + +E+S
Sbjct: 197 TDALNQLEPESDAADESVEEEEEEDEDS 224
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 492 REFAPNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQD 671
+E A D+D+ +DS S++ + L ++ S D+S S +S E G+P QD
Sbjct: 594 QEEASEDKDDSMDSAEAGERSDDPQDLRESSSSSDESDES---EGNSSPSEAPGSPRQQD 650
Query: 672 DE 677
E
Sbjct: 651 PE 652
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 546 PES-EEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDEDIAE 707
PES EE E G+ +E D+ + D+G E E PS +++E +E+ E
Sbjct: 355 PESSEEEEDEGNGDEDDDEEVEDD--EEDAGSDEAEEEPSDEEEEDEETEEEEEE 407
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 546 PES-EEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDEDIAE 707
PES EE E G+ +E D+ + D+G E E PS +++E +E+ E
Sbjct: 343 PESSEEEEDEGNGDEDDDEEVEDD--EEDAGSDEAEEEPSDEEEEDEETEEEEEE 395
>Z69646-6|CAD44142.1| 287|Caenorhabditis elegans Hypothetical
protein F57C7.3b protein.
Length = 287
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +1
Query: 247 SKCDVTTEPEELAANGGPTS-----SSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDI 411
+K D T P PT+ +S V+P P A ++ VE+ D EDE +
Sbjct: 94 TKSDKVTSPSHAVVTAKPTTVPTTTASFKPPVQPKPKPAANDKEIKVEEDEDDDEDEDED 153
Query: 412 DETASGAMNEESAYIGDNCLSTPADT 489
DE +E+ + ++ +T T
Sbjct: 154 DEDDEEDFADENIHNDEDFFTTTTTT 179
>Z69646-5|CAA93474.1| 288|Caenorhabditis elegans Hypothetical
protein F57C7.3a protein.
Length = 288
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +1
Query: 247 SKCDVTTEPEELAANGGPTS-----SSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDI 411
+K D T P PT+ +S V+P P A ++ VE+ D EDE +
Sbjct: 95 TKSDKVTSPSHAVVTAKPTTVPTTTASFKPPVQPKPKPAANDKEIKVEEDEDDDEDEDED 154
Query: 412 DETASGAMNEESAYIGDNCLSTPADT 489
DE +E+ + ++ +T T
Sbjct: 155 DEDDEEDFADENIHNDEDFFTTTTTT 180
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 492 REFAPNDQDNQLDSMIKEPESEEA--EGLGDAEESPDQSISSAILPTDSGVGEVEGAPSV 665
RE A +LD+ I E + +E E DAEE + S L S + E + S
Sbjct: 671 REEAAARAAQELDAPIPEGDDDEEKEEAGKDAEEKVREGDSDTDLSESSSSSDSESSSSS 730
Query: 666 QDDESSTMDED 698
D S + D+D
Sbjct: 731 SSDSSDSSDDD 741
>AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical
protein Y54G2A.11a protein.
Length = 482
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +3
Query: 492 REFAPNDQDNQLDSM------IKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEG 653
+ F+ +D D+ DS+ I EPE EEAE G A E + S + G EVE
Sbjct: 59 KSFSDSDSDSDSDSLSESESEISEPEEEEAEE-GAAAEILENS-------DNEGEDEVEE 110
Query: 654 APSVQDDESSTMDED 698
++++D S ED
Sbjct: 111 EGAIENDSESENSED 125
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 268 EP-EELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAMNEE 444
EP E++ PTSS+D V +EE P++++ +D + MDI + SG ++
Sbjct: 168 EPIEDIVEPNEPTSSADP-PVSNIKDEDIKEEEPLIKKPASDESESMDIANSESGNDSDS 226
Query: 445 S 447
S
Sbjct: 227 S 227
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 268 EP-EELAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAMNEE 444
EP E++ PTSS+D V +EE P++++ +D + MDI + SG ++
Sbjct: 182 EPIEDIVEPNEPTSSADP-PVSNIKDEDIKEEEPLIKKPASDESESMDIANSESGNDSDS 240
Query: 445 S 447
S
Sbjct: 241 S 241
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 414 IYVHFIFSICITLFNYRMLFLSXRCNRRLYVQNIAAASWTTIRSKFLRLSGHIALAEL-L 238
IY+ ++F I + Y FLS R NR L Q I TT + + + ++LA +
Sbjct: 11 IYLWYLFFIPFSNSYYFSSFLSNRINRNLLFQFIVVMGETTSINSAISSNSSLSLASTQV 70
Query: 237 SGKSSIVSATWL 202
V WL
Sbjct: 71 QSPEKPVRPAWL 82
>Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 567 GLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDEDIAEGGVA 719
GL + + +A + SG+GE +G + + E T++ED+ + G++
Sbjct: 94 GLSSIKYEHEDDEDAAQETSTSGMGERDGDIDMAELEDETLNEDVTDNGIS 144
>Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 567 GLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDEDIAEGGVA 719
GL + + +A + SG+GE +G + + E T++ED+ + G++
Sbjct: 94 GLSSIKYEHEDDEDAAQETSTSGMGERDGDIDMAELEDETLNEDVTDNGIS 144
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 373 EQGNADAEDEMDIDETASGAMNEE 444
E D EDE+D + A G +NEE
Sbjct: 80 ENSKVDPEDELDDENVAKGGLNEE 103
>Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical
protein H39E23.3 protein.
Length = 746
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +1
Query: 280 LAANGGPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIG 459
+ G PT + + EP P A E + AD D ES
Sbjct: 16 VTVQGFPTKDREARETEPVKLPTADSEKKAPTKREADPPKTESADSEKKAPTKRES---- 71
Query: 460 DNCLSTPADTEENSP 504
D + AD+E+N+P
Sbjct: 72 DKPKTESADSEKNAP 86
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 339 NRRLYVQNIA-AASWTTIRSKFLRLSGHIALAELLSGKS 226
NR +++ NIA A W ++S G +A ELL ++
Sbjct: 44 NRMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRN 82
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +1
Query: 295 GPTSSSDVLDVEPSIAPXAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLS 474
GP SS V V A EH V++ A+ E + + ET + A+ E A +
Sbjct: 192 GPVSSIQVTQVSQGGNYQAPPEHQAVQEIVAETEAPVVVAETEAPAVVETEAPVVIEETE 251
Query: 475 TPADTEENSPQMIK 516
P EE +++
Sbjct: 252 APVVVEETPAPVVE 265
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 NDQDNQLDSMI-KEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDD 674
++ D +LD + E EE +GD EE ++ + ILPT V E+E ++++
Sbjct: 562 HEDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDILPTPK-VEELEEKTVIKEE 617
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 NDQDNQLDSMI-KEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEVEGAPSVQDD 674
++ D +LD + E EE +GD EE ++ + ILPT V E+E ++++
Sbjct: 571 HEDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDILPTPK-VEELEEKTVIKEE 626
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,376,277
Number of Sequences: 27780
Number of extensions: 283459
Number of successful extensions: 1210
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -