Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021740
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.8  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 162 TGITMNGYKTIICKTKLMYCYCECLLFHI 76
           T ITM  +K I     + YCY  CL++ I
Sbjct: 203 THITMAHFKII---QVVPYCYINCLIYLI 228


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 104 QYINFVLQIMVL*PFIVMPVDADYNRTDV 190
           +YI  ++ + +L P  ++PV A  N T+V
Sbjct: 119 EYIYGIIFLSILIPHFLLPVAAWTNGTEV 147


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 104 QYINFVLQIMVL*PFIVMPVDADYNRTDV 190
           +YI  ++ + +L P  ++PV A  N T+V
Sbjct: 119 EYIYGIIFLSILIPHFLLPVAAWTNGTEV 147


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 433 YCTRLVFQYSAV 398
           YCT L++ Y+A+
Sbjct: 54  YCTHLIYGYAAI 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,901
Number of Sequences: 336
Number of extensions: 2982
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)