Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021740
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    24   5.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.3  

>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 455 DCTKSTLILHSFSFPVLRGDHDAH*FTFKC 366
           +C K T IL   +F VL GD        KC
Sbjct: 62  ECVKETGILPKNAFRVLSGDFSVDTMKAKC 91


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 360 WPTFESKLVRIVITAEYWKTKRVQY*STFSAI 455
           W T ESK V IV+       +R+++  T   +
Sbjct: 46  WVTDESKTVAIVVNGNRLPIQRIRHRQTLGVV 77


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,450
Number of Sequences: 2352
Number of extensions: 12799
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)