Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021739
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)      190   1e-48
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)              99   5e-21
SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)           98   8e-21
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)           83   2e-16
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)              81   7e-16
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)              74   1e-13
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)           54   1e-07
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)                   54   2e-07
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)                    48   6e-06
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)            44   1e-04
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 32   0.58 
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)                    28   7.2  
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)                 28   9.5  
SB_3531| Best HMM Match : Cytomega_US3 (HMM E-Value=6.7)               28   9.5  
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)                28   9.5  

>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
          Length = 293

 Score =  190 bits (463), Expect = 1e-48
 Identities = 87/91 (95%), Positives = 87/91 (95%)
 Frame = +3

Query: 255 FLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETIC 434
           FLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETIC
Sbjct: 46  FLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETIC 105

Query: 435 LLLAYKIKYPENFFLLRGNHECASIIGFMGF 527
           LLLAYKIKYPENFFLLRGNHECASI    GF
Sbjct: 106 LLLAYKIKYPENFFLLRGNHECASINRIYGF 136



 Score =  107 bits (257), Expect = 1e-23
 Identities = 49/67 (73%), Positives = 53/67 (79%)
 Frame = +2

Query: 509 NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIM 688
           NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+DEKIFCCHG    D+Q   +  R +
Sbjct: 131 NRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAILDEKIFCCHG--DKDVQGWGENDRGV 188

Query: 689 RPTDVPD 709
             T  PD
Sbjct: 189 SFTFGPD 195



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 28/43 (65%), Positives = 38/43 (88%)
 Frame = +1

Query: 127 DTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREI 255
           + ++LN+D++I +LL+VRG +PG NVQLTE EI+GLCLKSREI
Sbjct: 3   EPEKLNVDSIISRLLEVRGSRPGKNVQLTEAEIRGLCLKSREI 45


>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1150

 Score = 98.7 bits (235), Expect = 5e-21
 Identities = 49/97 (50%), Positives = 63/97 (64%)
 Frame = +3

Query: 273 LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK 452
           +LE++AP+ +CGDIHGQ+YDL++LFE GG P  + YLFLGDYVDRG  S+E  CL     
Sbjct: 76  MLEVDAPITVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIE--CL----- 128

Query: 453 IKYPENFFLLRGNHECASIIGFMGFTMSAKGGITLNY 563
             Y    FLLRGNHEC  +  +  FT   +    L+Y
Sbjct: 129 --YTNTLFLLRGNHECRHLTEY--FTFKTESANFLDY 161



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 27/72 (37%), Positives = 50/72 (69%)
 Frame = +2

Query: 539 KRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGL 718
           K +Y+  ++    + F+CLP+AA+++++  C HGGLSP++  ++ ++++ R  + P  G 
Sbjct: 188 KIKYSEAVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDVKKLDRFKEPPAFGP 247

Query: 719 LCDLLWSDPDKD 754
           +CDLLWSDP +D
Sbjct: 248 MCDLLWSDPLED 259


>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
          Length = 173

 Score = 97.9 bits (233), Expect = 8e-21
 Identities = 43/82 (52%), Positives = 55/82 (67%)
 Frame = +3

Query: 282 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 461
           + +P+ +CGDIHGQ+YDL  LF  GG  P ++Y+F+GD+VDRG  SLET   LL  K K+
Sbjct: 42  VSSPVTVCGDIHGQFYDLEELFRTGGQVPNTSYVFMGDFVDRGYYSLETFTRLLTLKAKW 101

Query: 462 PENFFLLRGNHECASIIGFMGF 527
           P+   LLRGNHE   I    GF
Sbjct: 102 PDRITLLRGNHESRQITQVYGF 123



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +2

Query: 503 QHNRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 673
           Q  ++YGFYDEC+ +Y N   W+     F+ L VAAI+D ++ C HGGLSPD++ ++Q
Sbjct: 116 QITQVYGFYDECQSKYGNANAWRYCCKVFDLLTVAAIIDGQVLCVHGGLSPDIKTIDQ 173


>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
          Length = 199

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = +3

Query: 186 EAWYECSVDGNRN*RAMFEIKRNFLSQPI-LLELEAPLKICGDIHGQYYDLLRLFEYGGF 362
           E   EC        + + E  +  LS+   + E++ P+ +CGD+HGQ++DL+ LF  GG 
Sbjct: 16  EQLMECKQLTEAQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGK 75

Query: 363 PPESNYLFLGDYVDRGKQSLETICLLLAYK 452
            P++NYLF+GDYVDRG  S+ET+ LL+  K
Sbjct: 76  SPDTNYLFMGDYVDRGYYSVETVTLLVTLK 105



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +2

Query: 710 QGLLCDLLWSDPD 748
           +G +CDLLWSDPD
Sbjct: 105 KGPMCDLLWSDPD 117


>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = +3

Query: 228 RAMFEIKRN-FLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 404
           R + ++ R  FL QP+LLE+ AP+ I GDIHGQY DLLR F+  G+PP  +Y+FLGDYVD
Sbjct: 38  RQICQVSREIFLQQPMLLEIGAPINIFGDIHGQYEDLLRHFDKLGYPPNESYIFLGDYVD 97

Query: 405 RGKQ 416
           R K+
Sbjct: 98  RPKR 101



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +1

Query: 139 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREI 255
           L++DNVI++LL  + + PG  VQL E +I+ +C  SREI
Sbjct: 10  LDVDNVIEQLLSYK-KNPGKQVQLPEAQIRQICQVSREI 47


>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 38/68 (55%), Positives = 45/68 (66%)
 Frame = +2

Query: 554 IKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLL 733
           I+L +  T  F+  P +A    K         P++ +MEQIRRIMRPTDVPD GLLCDLL
Sbjct: 23  IQLQQASTAIFDYAPYSACAQRKTLA---NFPPNM-SMEQIRRIMRPTDVPDTGLLCDLL 78

Query: 734 WSDPDKDT 757
           WSDPDKDT
Sbjct: 79  WSDPDKDT 86


>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
          Length = 417

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +3

Query: 357 GFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 497
           G P PE+ Y+F GD VDRG +S+E   +L A+ I YP   ++ RGNHE
Sbjct: 2   GLPSPENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGNHE 49



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +2

Query: 566 KTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDP 745
           +TF      LP+A IV+ KIF  HGG+S ++  ++ I RI       D+  + DLLWSDP
Sbjct: 77  RTFRKYLGWLPLATIVNNKIFVAHGGIS-NITDLDIIERI-------DRHKVLDLLWSDP 128


>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
          Length = 720

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
 Frame = +3

Query: 258 LSQPILLELEAPLKICGDIHGQYYDLL----RLFEYGGFPPESNYLFLGDYVDRGKQSLE 425
           + +P +L +++P+ + GD+HG + DL+     L+  G     SN+LFLGDYVDRG+  +E
Sbjct: 661 MEEPRMLRVQSPVYVLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDYVDRGENGVE 720


>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
          Length = 465

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +2

Query: 689 RPTDVPDQGLLCDLLWSDPDKD 754
           RP DVPD+GL+CDLLWSDPD+D
Sbjct: 116 RPMDVPDKGLVCDLLWSDPDED 137


>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
          Length = 250

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/66 (36%), Positives = 34/66 (51%)
 Frame = +3

Query: 300 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 479
           + GDIHG    L +LFE          +FLGDYVD   +S  TI  L+  +I    +   
Sbjct: 7   VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLI--EIAEKHDCIF 64

Query: 480 LRGNHE 497
           ++GNH+
Sbjct: 65  IKGNHD 70


>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 1507

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
 Frame = -1

Query: 513  LLCWHTRGFRVKERNSRDI*-SCRRGAGILFPTTACHGP----HSLRG--RDSWTPEGSH 355
            L C  +RG  +    SRD+  +C    G+       HG     ++ RG    S T  G  
Sbjct: 1068 LTCNTSRGVTLTRNTSRDVALTCNTSRGVTLTRNTSHGVTLTLNTSRGVTLSSKTSRGVS 1127

Query: 354  HTQTTLRGHSIVHVCHRKFSKELQVQVV*AVTRNFS 247
            HT+ T RG S+ +   R  +          +TRN S
Sbjct: 1128 HTRNTSRGLSLTYNTSRSVTLTCNTSRGVTLTRNTS 1163


>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
          Length = 493

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 402 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 503
           D  KQS  T+C+LL Y+ KY E  + +  N EC+
Sbjct: 444 DTTKQSRRTVCMLL-YRAKYIEGCY-ISVNTECS 475


>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
          Length = 242

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 423 PTTACHGPHSLRGRDSWTPEGSHHTQTTLRGH 328
           PT   HGPH+     +WTP G  HT  T   H
Sbjct: 202 PTRTPHGPHT---DPTWTPHGP-HTDPTRNPH 229


>SB_3531| Best HMM Match : Cytomega_US3 (HMM E-Value=6.7)
          Length = 519

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +2

Query: 593 LPVAAIVDEKIFCCHG 640
           +P++ ++D+++FCC G
Sbjct: 71  VPISVVLDDRVFCCQG 86


>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
          Length = 195

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 510 IGFMGFTMSAKGGITLNYGRRSQTAS 587
           +G  GF  + K G+T NYG   Q  S
Sbjct: 160 VGIFGFLATGKNGVTGNYGMLDQVKS 185


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,934,917
Number of Sequences: 59808
Number of extensions: 541911
Number of successful extensions: 1634
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)