Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021737
(745 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 146 4e-34
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 122 7e-27
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 121 2e-26
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 116 6e-25
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 111 2e-23
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 110 3e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 107 3e-22
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 100 3e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 99 1e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 98 2e-19
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 97 3e-19
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 97 3e-19
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 94 3e-18
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 93 7e-18
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 90 5e-17
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 89 8e-17
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 83 5e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 77 5e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 75 2e-12
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 74 3e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 70 5e-11
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 69 2e-10
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 65 2e-09
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 64 3e-09
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 63 8e-09
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 60 6e-08
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 58 2e-07
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 54 3e-06
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 53 9e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.065
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 40 0.085
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 38 0.34
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.4
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.4
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.4
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 34 4.2
UniRef50_Q64RY0 Cluster: Tyrosine type site-specific recombinase... 34 4.2
UniRef50_Q0K1C4 Cluster: Transcriptional regulator, MocR family;... 34 4.2
UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase fam... 34 4.2
UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 33 5.6
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 33 7.4
UniRef50_UPI0000D9DBDF Cluster: PREDICTED: hypothetical protein;... 33 7.4
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 7.4
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 7.4
UniRef50_Q7S3K1 Cluster: Predicted protein; n=1; Neurospora cras... 33 7.4
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 33 9.8
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 146 bits (355), Expect = 4e-34
Identities = 66/77 (85%), Positives = 75/77 (97%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+ E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKG
Sbjct: 12 VSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKG 71
Query: 693 PLIIFNKDQGLTRAFRN 743
PLII+NKDQGLTR+FRN
Sbjct: 72 PLIIYNKDQGLTRSFRN 88
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 122 bits (295), Expect = 7e-27
Identities = 54/78 (69%), Positives = 68/78 (87%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 689
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 690 GPLIIFNKDQGLTRAFRN 743
GP II+N+D G+ +AFRN
Sbjct: 206 GPCIIYNEDNGIIKAFRN 223
Score = 120 bits (290), Expect = 3e-26
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 121 bits (292), Expect = 2e-26
Identities = 53/77 (68%), Positives = 68/77 (88%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 693 PLIIFNKDQGLTRAFRN 743
PL++++KD+GL +AFRN
Sbjct: 210 PLVVYDKDEGLRKAFRN 226
Score = 117 bits (281), Expect = 4e-25
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +2
Query: 221 EAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 400
+A + E G +QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 401 RRWH 412
RRWH
Sbjct: 112 RRWH 115
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +3
Query: 69 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 248
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 249 AG 254
AG
Sbjct: 61 AG 62
Score = 37.5 bits (83), Expect = 0.34
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 445 LGGSVAATGVPALVQARGHIIERFPNFP 528
L ++AA+GVPALVQ++GH+I+ FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 116 bits (279), Expect = 6e-25
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 177 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +3
Query: 102 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAG 176
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 111 bits (266), Expect = 2e-23
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 239 EQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
E+ G +QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 55 EKAG-HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +3
Query: 84 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AG
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAG 58
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Frame = +3
Query: 510 KIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 680
++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHR 204
Query: 681 QRKGPLIIFN---KDQGLTRAFRN 743
QR+GPL++++ + L RAFRN
Sbjct: 205 QRRGPLVVYDGATDGKELVRAFRN 228
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 110 bits (265), Expect = 3e-23
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 36 HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Frame = +3
Query: 513 IPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 683
+PE+PLV++ I KT AV L+ + A +D K S++LRAGKGK+R RR Q
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQ 182
Query: 684 RKGPLIIFNKDQG---LTRAFRN 743
R+GPL+I+N D+ L +AFRN
Sbjct: 183 RRGPLVIYNPDEDGKELVKAFRN 205
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 107 bits (257), Expect = 3e-22
Identities = 46/55 (83%), Positives = 48/55 (87%)
Frame = +2
Query: 245 GGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 409
G Y+TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+ G
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNG 206
Query: 693 PLIIFNKDQGLTRAFRN 743
PLII++ D G+ +AFRN
Sbjct: 207 PLIIYSXDSGIKKAFRN 223
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 100 bits (240), Expect = 3e-20
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
YQTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 59 YQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = +3
Query: 87 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSG 58
Score = 41.5 bits (93), Expect = 0.021
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +3
Query: 519 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 698
E+P+VV D +++INKTK AV L + +++ ++ K G+ R+ R+ + GPL
Sbjct: 148 EVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKV------TGRARDGRKKRPVGPL 201
Query: 699 IIFNKD--QGLTRAFRN 743
II +G RAFRN
Sbjct: 202 IILRATAVEG-KRAFRN 217
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 98.7 bits (235), Expect = 1e-19
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
YQTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 59 YQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 81 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSG 58
Score = 37.9 bits (84), Expect = 0.26
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R G
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR------PVG 198
Query: 693 PLIIFNKD--QGLTRAFRN 743
PL++ +G RAFRN
Sbjct: 199 PLVVMRSTAVEG-KRAFRN 216
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +2
Query: 263 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/77 (49%), Positives = 57/77 (74%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+G
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Query: 693 PLIIFNKDQGLTRAFRN 743
P+++ ++G TRAFRN
Sbjct: 206 PMLVMPNNKG-TRAFRN 221
Score = 66.1 bits (154), Expect = 9e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 84 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/77 (55%), Positives = 61/77 (79%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR+G
Sbjct: 150 VPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRG 209
Query: 693 PLIIFNKDQGLTRAFRN 743
PL+++++D G+TRAFRN
Sbjct: 210 PLVVYSEDNGVTRAFRN 226
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 132 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 218
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/64 (70%), Positives = 47/64 (73%)
Frame = +2
Query: 221 EAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 400
+A + Q G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGM-QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 401 RRWH 412
RRWH
Sbjct: 110 RRWH 113
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 689
++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RK
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRK 206
Query: 690 GPLII-FNKDQGLTRAFRN 743
GPL++ FN++ L +AFRN
Sbjct: 207 GPLVVYFNENAKLLKAFRN 225
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAG 60
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 94.3 bits (224), Expect = 3e-18
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+Q SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQR 686
+PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCA 207
Query: 687 KGPLIIFNKDQGLTRAFRN 743
GPL+++ +D G+ +A RN
Sbjct: 208 VGPLVVYAEDNGIVKAMRN 226
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 445 LGGSVAATGVPALVQARGHIIERFPNFP 528
+ ++AATG P+LV ARGH I P P
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELP 152
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 93.1 bits (221), Expect = 7e-18
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +2
Query: 260 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR + G
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTG 200
Query: 693 PLIIFNKDQGLTRAFRN 743
PL++F + R N
Sbjct: 201 PLLVFKNNLKSLRNIAN 217
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 90.2 bits (214), Expect = 5e-17
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +3
Query: 543 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 722
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 723 LTRA 734
+ +A
Sbjct: 158 IIKA 161
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2
Query: 197 SRFYVQELEAALLREQGGWYQTSAESWGTGRAVARIPRVRGGG 325
S + + + + E G YQTSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAG-YQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 89.4 bits (212), Expect = 8e-17
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+Q SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 60 HQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G
Sbjct: 147 VPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRG 206
Query: 693 PLIIFNKDQGLTRAFRN 743
LI+ ++++GL AFRN
Sbjct: 207 VLIVHDQNEGLANAFRN 223
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 93 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 233
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 409
Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +3
Query: 522 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 701
LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG LI
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILI 206
Query: 702 IFNKDQGLTRAFRN 743
+ + + FRN
Sbjct: 207 VHGESSEML-GFRN 219
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 96 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAG 56
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = +3
Query: 501 HY*KIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRR 677
H +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKI 202
Query: 678 IQRKGPLIIF-NKDQGLTRAFRN 743
+RKGPL+++ N D +AFRN
Sbjct: 203 KERKGPLVVYGNDDLQAVKAFRN 225
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 409
Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 84 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAG 59
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 457 VAATGVPALVQARGHIIERFPNFPWL*PTKS 549
+AA+ VPALV ARGH I P P + +KS
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 668
++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRNRR I RKG
Sbjct: 10 VPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKG 69
Query: 693 PLIIFNKDQG-LTRAFRN 743
PLI++ + L +AFRN
Sbjct: 70 PLIVYGMEGAKLVKAFRN 87
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/78 (41%), Positives = 52/78 (66%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 689
++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R +K
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKK 202
Query: 690 GPLIIFNKDQGLTRAFRN 743
GPL+I+N+D+G+ +AFRN
Sbjct: 203 GPLVIYNEDKGIVKAFRN 220
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 409
+ SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +3
Query: 81 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGTK 260
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG K
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 74.1 bits (174), Expect = 3e-12
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 62 QVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/77 (36%), Positives = 51/77 (66%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR ++ K
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKS 200
Query: 693 PLIIFNKDQGLTRAFRN 743
LI+ ++D+G+ RN
Sbjct: 201 VLIVVDEDEGIKLGARN 217
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 409
++TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 54 FRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 90 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAG 53
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +3
Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKG
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Query: 693 PLIIFNKDQGLTRAFRN 743
PL+I+N + + R FRN
Sbjct: 195 PLVIYNTED-VARGFRN 210
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 409
Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = +3
Query: 90 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGTK 260
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG +
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +3
Query: 534 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 710
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 711 KDQGLTRAFRN 743
++ L +AFRN
Sbjct: 61 ENAKLLKAFRN 71
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +3
Query: 519 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 698
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +++K L
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVL 195
Query: 699 IIFNKDQGLTRAFRN 743
++ KD G+ +A +N
Sbjct: 196 LVVGKDDGVVKAAKN 210
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 62.9 bits (146), Expect = 8e-09
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +3
Query: 519 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 698
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K L
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVL 199
Query: 699 IIFNKDQGLTRAFRN 743
I+ + +AFR+
Sbjct: 200 IVARNSSAM-KAFRS 213
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 60.1 bits (139), Expect = 6e-08
Identities = 23/78 (29%), Positives = 48/78 (61%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 689
++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R+ K
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPK 195
Query: 690 GPLIIFNKDQGLTRAFRN 743
GPL++ D+G++ RN
Sbjct: 196 GPLVVVGNDRGISLGARN 213
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 394
+T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 689
K+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR + K
Sbjct: 163 KVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPK 222
Query: 690 GPLIIFNK-DQGLTRAFRN 743
L++ + + L A RN
Sbjct: 223 SVLVVVSDLNAPLIAAVRN 241
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +2
Query: 242 QGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+G + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 525 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 704
P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ + GPLII
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLII 206
Query: 705 -FNKDQGLTRAFRN 743
+ + + +A RN
Sbjct: 207 VHDSNSPIIKAARN 220
Score = 32.7 bits (71), Expect = 9.8
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 236 REQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 388
R+ +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +3
Query: 531 VVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 710
+V D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKGPLI+ N
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVN 212
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 39.9 bits (89), Expect = 0.065
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 257 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 394
+TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 68 RTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
Score = 39.5 bits (88), Expect = 0.085
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 495 RTHY*KIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 671
R H LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR R
Sbjct: 142 RGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
Query: 672 RRIQRKGPLII 704
R K L +
Sbjct: 202 RYKVPKSVLFV 212
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 39.5 bits (88), Expect = 0.085
Identities = 28/74 (37%), Positives = 33/74 (44%)
Frame = +1
Query: 205 LCPRTRGSPTA*ARRLVPNQCRIMGYRTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVR 384
L P RG P R P ++G+R SA W VR C+R HV WW +VR
Sbjct: 99 LAPGVRGEPPV---RHEPLGA-LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
Query: 385 PHEALAALASSRQP 426
E L LA QP
Sbjct: 155 ADEDLPPLAPQDQP 168
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 37.5 bits (83), Expect = 0.34
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +2
Query: 65 RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQ 244
R ++G P GV + R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG---GVGARRRGGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 245 GGWYQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 382
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 296 ARIPRVRGGGTHRSGQGAFGNMCRGG 373
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 236 REQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 376
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 368 HDTCYRRHPDRTYEYHHHGHAEFGRQH 288
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 281 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 394
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 33.9 bits (74), Expect = 4.2
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -3
Query: 470 PVAATLPPRPLSXXXXXXXXXXXXXASWGRTYVHHDTCYRRHPDRTYEYHHHG-HAEFGR 294
P+A +PP PL + R HH + HP + HHH ++ GR
Sbjct: 356 PIAFAVPPPPLHTSTTTKHNSWHSGVATSR---HHQ---QYHPPHHQQQHHHNKNSSQGR 409
Query: 293 QHVRYPMIRH-WFGTSLLAHAVGLPRVLGHRN 201
H P H TS + G PR + H N
Sbjct: 410 HHNNIPFRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_Q64RY0 Cluster: Tyrosine type site-specific recombinase;
n=4; Bacteroidales|Rep: Tyrosine type site-specific
recombinase - Bacteroides fragilis
Length = 403
Score = 33.9 bits (74), Expect = 4.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 YEYHHHGHAEFGRQHVRYPMIRHWFGTSLLAHAV---GLPRVLGHRNVNIIDQVRTYGRL 162
YE H G A ++++ Y M RH FGT L + + R++GH N ID + Y ++
Sbjct: 321 YEVHGMGVALGMKENLSYHMARHSFGTLTLTAGIPIESIARMMGHTN---IDSTQVYAQV 377
>UniRef50_Q0K1C4 Cluster: Transcriptional regulator, MocR family;
n=1; Ralstonia eutropha H16|Rep: Transcriptional
regulator, MocR family - Ralstonia eutropha (strain ATCC
17699 / H16 / DSM 428 / Stanier 337)(Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier337))
Length = 477
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 382 RPHEALAALASSRQPPTAESGLGGSVAATGVPALVQARGHIIERFPNFPW 531
RPH AA SSR PP E G+PA +Q ++ FP W
Sbjct: 86 RPHRVAAAAGSSRTPPNQELTEFSIETEGGIPAPLQLGLPALDEFPRKLW 135
>UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase family
protein; n=1; Trichomonas vaginalis G3|Rep:
Phosphatidylinositol 3-and 4-kinase family protein -
Trichomonas vaginalis G3
Length = 2286
Score = 33.9 bits (74), Expect = 4.2
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 728 SQTLILVEDYEGPLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQE-DDSLFGLVDL 552
SQ LI+ +Y L ++ F TS+ + V LK + C Q+ + S++ ++DL
Sbjct: 1065 SQKLIIDSEYLRGKILPIAFLSCFLNTSSDQ-KEVFLKQLNDCFSLGQKINSSIYKIIDL 1123
Query: 551 LDFVGYN 531
L+ +GYN
Sbjct: 1124 LEMLGYN 1130
>UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya
CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED:
similar to achintya CG8819-PA, isoform A - Apis
mellifera
Length = 447
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 356 YRRHPDRTYEYHHHGHAEFGRQHVRY 279
YRRH + YHHH H R H RY
Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 218 LEAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSG 340
L A+ R GG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_UPI0000D9DBDF Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 299
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 165 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGTKPVPNHGVPDVLSPE 302
A R D + +++SRQP S+E G +P+P GV +PE
Sbjct: 224 ARARRGTAGDAANAAARSSRQPQIESREGGPRPLPRRGVRGPETPE 269
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.1 bits (72), Expect = 7.4
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 377 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRH 264
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 377 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWFGTSLLAHAV 231
YV H H DR E+ H A G H P+I HWF ++ H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_Q7S3K1 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 352
Score = 33.1 bits (72), Expect = 7.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 168 PIRPDLVNDVHVSMSKNSRQPYCVSKEAGTKPVPNHGVP 284
P +PDL + H ++++ P + E KP PNH P
Sbjct: 134 PAQPDLQTETHAIRARDAGPPTRQTDEMNLKPTPNHWAP 172
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 383 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 291
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 32.7 bits (71), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 380 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIR 267
+Y H + RH R+Y + HH H R R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,021,743
Number of Sequences: 1657284
Number of extensions: 16465950
Number of successful extensions: 53142
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 49105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52695
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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