BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021737 (745 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 114 6e-26 07_01_0578 + 4295386-4296489,4297394-4297507 114 8e-26 10_02_0199 + 6668902-6669293,6669825-6669882 35 0.059 12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 34 0.14 07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.24 11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 31 0.73 03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 30 2.2 01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 30 2.2 09_03_0046 + 11862923-11863112,11863225-11863406,11863522-118636... 29 2.9 08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 3.9 05_03_0163 + 9070781-9071320 29 3.9 10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 9.0 08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 28 9.0 08_02_1285 - 25881091-25881798 28 9.0 07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 28 9.0 07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 28 9.0 >03_06_0298 - 32925441-32925998,32926371-32926730,32927161-32927230, 32927642-32927797,32929181-32929242,32929339-32929352, 32930421-32930520,32931474-32932574 Length = 806 Score = 114 bits (275), Expect = 6e-26 Identities = 48/53 (90%), Positives = 51/53 (96%) Frame = +2 Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412 +QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115 Score = 81.8 bits (193), Expect = 5e-16 Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%) Frame = +3 Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692 +PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKG Sbjct: 150 VPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKG 209 Query: 693 PLIIFNKD-QGLTRAFRN 743 PLI++ + + +AFRN Sbjct: 210 PLIVYGTEGSKVVKAFRN 227 Score = 54.4 bits (125), Expect = 9e-08 Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Frame = +3 Query: 78 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254 + ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62 Score = 36.3 bits (80), Expect = 0.026 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +1 Query: 445 LGGSVAATGVPALVQARGHIIERFPNFP 528 + ++AAT VP+LV ARGH IE P FP Sbjct: 127 VASALAATAVPSLVLARGHRIEGVPEFP 154 >07_01_0578 + 4295386-4296489,4297394-4297507 Length = 405 Score = 114 bits (274), Expect = 8e-26 Identities = 47/53 (88%), Positives = 51/53 (96%) Frame = +2 Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412 +QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH Sbjct: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116 Score = 81.4 bits (192), Expect = 7e-16 Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%) Frame = +3 Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 692 +PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKG Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKG 210 Query: 693 PLIIFNKD-QGLTRAFRN 743 PLI++ + + +AFRN Sbjct: 211 PLIVYGTEGSKIVKAFRN 228 Score = 52.4 bits (120), Expect = 4e-07 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Frame = +3 Query: 87 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254 RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AG Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAG 63 Score = 34.3 bits (75), Expect = 0.10 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 Query: 445 LGGSVAATGVPALVQARGHIIERFPNFP 528 + ++AAT VP+LV ARGH IE P P Sbjct: 128 VASALAATSVPSLVLARGHRIETVPELP 155 >10_02_0199 + 6668902-6669293,6669825-6669882 Length = 149 Score = 35.1 bits (77), Expect = 0.059 Identities = 21/47 (44%), Positives = 23/47 (48%) Frame = +2 Query: 236 REQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 376 RE GG A+SW TGRA A + R R GG R A N G R Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72 >12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-614845 Length = 291 Score = 33.9 bits (74), Expect = 0.14 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = +2 Query: 50 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 205 ASL N I +PTF +G K G S + + GAHT G + C F Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176 >07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 Length = 292 Score = 33.1 bits (72), Expect = 0.24 Identities = 20/52 (38%), Positives = 23/52 (44%) Frame = +2 Query: 50 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 205 ASL N + P+F V G SQA V + GAHT G Q C F Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175 >11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-571872 Length = 291 Score = 31.5 bits (68), Expect = 0.73 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = +2 Query: 50 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 205 ASL N I +PT +G K G S + + GAHT G + C F Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176 >03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-969434 Length = 477 Score = 29.9 bits (64), Expect = 2.2 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 221 EAALLREQGGWYQTSAESWGTGRAV 295 EAALLR G W + + + WG G V Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391 >01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 Length = 248 Score = 29.9 bits (64), Expect = 2.2 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -3 Query: 335 TYEYHH-HGHAEFGRQHVRYPMIRHWFGTSLLAHAVGLPRVLGH 207 T+++HH HGH FGR H +P H G ++ + G P H Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHHPAG-GMVNYGGGAPYYAAH 184 >09_03_0046 + 11862923-11863112,11863225-11863406,11863522-11863634, 11863894-11864140,11864333-11864452,11864601-11864604, 11864800-11864846,11864992-11865068,11865381-11865431, 11865519-11865567,11865694-11865718,11866226-11866344 Length = 407 Score = 29.5 bits (63), Expect = 2.9 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +1 Query: 400 AALASSRQPPTAES-GLGGSVAATGVPALVQARGHIIERFPNFPWL*PTKSRRSTRPNRL 576 A L ++ PP + + G AA G+P LV+A I P+L P S + + Sbjct: 13 ALLRAAHVPPAPRARSIRGLAAARGLPPLVRATAAAIAPSSFCPYL-PRLSSARSFSSST 71 Query: 577 SSS*GASRHGLIS 615 S S GAS G +S Sbjct: 72 SCSAGASLGGAVS 84 >08_02_0105 + 12448808-12449152,12449218-12449409,12449520-12449685, 12449771-12450201 Length = 377 Score = 29.1 bits (62), Expect = 3.9 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 50 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 205 ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247 >05_03_0163 + 9070781-9071320 Length = 179 Score = 29.1 bits (62), Expect = 3.9 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +2 Query: 236 REQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQG 346 R GGW Q AE WG G ++ GGG RS +G Sbjct: 15 RGAGGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50 >10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418, 3959482-3960445,3960588-3960648,3961500-3961946 Length = 1024 Score = 27.9 bits (59), Expect = 9.0 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 392 SWGRTYVHHDTCYRRHPDRTYEYHH 318 SWGR H D RR P R+ +HH Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325 >08_02_1437 - 27096364-27097252,27098931-27099022,27099382-27099654, 27099872-27100819 Length = 733 Score = 27.9 bits (59), Expect = 9.0 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +1 Query: 382 RPHEALAALASSRQPPTAESGLGGSVAATGVPALVQARGHII 507 R ++ L+ +A +PP +S G A G PA+ G+ + Sbjct: 653 RVNDWLSEIAKPTEPPPPQSDADGEEAGGGAPAVANGGGNTV 694 >08_02_1285 - 25881091-25881798 Length = 235 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 113 KERDGAGCSQAPPVRVQGAHTSGPG 187 +E DG G ++A V +GAH +G G Sbjct: 173 EEEDGEGSAEAMEVEEEGAHLAGAG 197 >07_03_0329 + 16840051-16840917,16840999-16841342,16841444-16841574, 16841671-16841792,16841877-16841983,16842104-16842236, 16842342-16842458,16842560-16842667,16842716-16842742, 16842759-16842830,16843462-16843584,16843671-16843833, 16844140-16844264,16844355-16844489,16844574-16844677, 16844772-16844834,16844930-16844993,16845186-16845318, 16845414-16845487,16845603-16845697,16845799-16845830, 16846201-16846355 Length = 1097 Score = 27.9 bits (59), Expect = 9.0 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 245 GGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 358 GG++ +G GR RGGG R G+G G+ Sbjct: 169 GGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGS 206 >07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298, 3895929-3896167,3896524-3896610,3896967-3897066, 3897908-3898115,3898224-3899422 Length = 1442 Score = 27.9 bits (59), Expect = 9.0 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Frame = +2 Query: 212 QELEAALLREQGGWYQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 376 +++ A ++GG S S G++V + + R+R H G G+ G++ + GG+ Sbjct: 64 EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122 Query: 377 MFAPTKP-WR 403 M P P WR Sbjct: 123 MLRPGFPKWR 132 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,751,293 Number of Sequences: 37544 Number of extensions: 506911 Number of successful extensions: 1808 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1708 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1803 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1968901276 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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