Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021737
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 119 2e-27
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 36 0.035
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 36 0.046
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 35 0.061
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 32 0.56
SB_16362| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 4.0
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 4.0
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 28 7.0
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11) 28 7.0
SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 28 7.0
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17) 28 9.2
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 9.2
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 9.2
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 9.2
SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 28 9.2
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 119 bits (287), Expect = 2e-27
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +2
Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
+QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 57 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWH 109
Score = 98.3 bits (234), Expect = 6e-21
Identities = 43/78 (55%), Positives = 59/78 (75%)
Frame = +3
Query: 510 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 689
KI E+PLV++D ++ + KT AV L+ + A+ D+ K S+++RAGKGKMRNRR + RK
Sbjct: 143 KIAEVPLVISDAIESVTKTSAAVKLLKAVNAYEDVEKCIDSKKIRAGKGKMRNRRTVMRK 202
Query: 690 GPLIIFNKDQGLTRAFRN 743
GPLII+N DQGL +AFRN
Sbjct: 203 GPLIIYNNDQGLRQAFRN 220
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 84 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 254
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AG
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAG 56
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 454 SVAATGVPALVQARGHIIERFPNFP 528
++AA+ +PAL+ ARGH IE+ P
Sbjct: 124 ALAASALPALIMARGHRIEKIAEVP 148
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 245 GGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 406
GGW Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 14 GGWGQGPGGGWGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 245 GGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 406
GGW Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 258 GGWGQGPGGGWGRGQGRG-MGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 371 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWF 258
HH CY H Y Y+ H H + R H YP RH++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 371 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVRY 279
HH RH R + +HHH H E+ R+H RY
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH-RY 353
>SB_16362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Frame = -3
Query: 386 GRTYVHHDTCYRR-HPDRTYEYHHHGHAEFGRQHVRYPMIRHWFGTSLLA-----HAVGL 225
G Y HH+ C+ Y H H Q +++ +R W+ L H +GL
Sbjct: 75 GVHYGHHEGCWNPLMKPYLYGTREHFHIIDLNQTIKHFRVRLWYFVYLYGNREHFHIIGL 134
Query: 224 PRVLGHRNVNIIDQVRTYGRLEH 156
+ + H V + V YG EH
Sbjct: 135 NQTIKHFRVRLWYFVYLYGNREH 157
>SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 677 TTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQ 528
+T + HF KT R +H+K P E GL+D+LD G+ Q
Sbjct: 18 STVLHHFIDKHAKTPRFLHMKP-----NGPGEGGGSSGLLDMLDAAGFEQ 62
>SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 335 TYEYHHHGHAEFGRQHVRYPMI-RHWFGTSLLAHAVGLP-RVLGHRNVN 195
+Y++HHHG E Q V I R W L +H P RV+G ++
Sbjct: 21 SYQWHHHGTGETDDQPVTTTRITRTWVNRRLNSHRTIKPSRVIGRAQIH 69
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 356 YRRHPDRTYEYHHHGHAEFGRQHVRYPMIRH 264
Y +HP T+ YH H R H ++P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 356 YRRHPDRTYEYHHHGHAEFGRQHVRYPMIRH 264
Y +HP T+ YHH H + ++ ++P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 380 TYVHHDTCYRRHPDRTYEYHHHGHA 306
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -3
Query: 383 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRY 279
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 260 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 376
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 371 HHDTCYRRHPDRTYEYHHH 315
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 151 GRGLAAPCTVSLFSEYTDTKGRATDRLI 68
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11)
Length = 1384
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 394 ALAALASSRQPPTAESGLGGSVAATGVPALVQARGHIIERFPNF 525
AL +S PT E L +VAAT P + A + + PNF
Sbjct: 354 ALNTTVASTPSPTVEIALNTTVAATPSPTVEIALDNTVAATPNF 397
>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 182 PGQ*CSRFYVQELEAALLREQG-GWYQTSAESWGTGRAVARIPRVRGGGT 328
P Q C + E+ +L G G Y AE G ARI +RG GT
Sbjct: 596 PAQPCKHLHSYTFESNILGNTGTGGYPGFAERGGRASYQARIQDLRGKGT 645
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 377 YVHHDTCYRRHPDRTYEYHHHGH 309
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 383 RTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQHVRY 279
R Y H CYRR R + YHHH + +RY
Sbjct: 216 RCYYHCRRRCYRRR--RRHFYHHHPRRYHNHRRLRY 249
>SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17)
Length = 278
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 362 TCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWFGTSLL 243
TC+ HP + Y H+ H F + H + RH+ TS L
Sbjct: 52 TCFPYHPHYHHHYRHNDH-YFHQDH----LYRHYLSTSAL 86
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 371 HHDTCYRRHPDRTYEYHHH 315
HH + RH R + YHHH
Sbjct: 570 HHHLHHHRHHHRHHHYHHH 588
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 371 HHDTCYRRHPDRTYEYHHHGH 309
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +2
Query: 212 QELEAALLREQGGWYQTSAESWGTGRA----VARIPR-VRGGGTHRS 337
+ E+AL E+ W Q AES T RA +AR+ R GT RS
Sbjct: 3432 EHAESALAAERAQWAQEKAESQNTIRAANEEIARLKEDARKAGTERS 3478
>SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 532
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 253 VPNQCRIMGYRTCCRPNSACPWWWYS*VR-SGC 348
VP++ I+ +R CCR N C W+W R +GC
Sbjct: 236 VPDRL-IVSFRGCCRVN--CNWYWSGWSRCTGC 265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,517,160
Number of Sequences: 59808
Number of extensions: 511307
Number of successful extensions: 1601
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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