Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021736
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0080 + 13193001-13193312 33 0.20
11_06_0176 + 20929629-20929791,20929918-20930333,20930449-209307... 31 0.61
11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009 30 1.4
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 29 2.5
07_03_1681 + 28624899-28625075,28625224-28625400,28625508-286256... 29 3.3
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 29 3.3
06_03_1342 + 29461083-29461365,29461991-29462029,29462257-29462285 29 3.3
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283... 29 3.3
02_05_0367 - 28331479-28332358,28332432-28332988,28333454-283336... 29 3.3
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 29 3.3
07_03_1680 + 28620244-28620480,28620556-28620732,28620819-286209... 28 5.7
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 28 5.7
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 28 5.7
10_06_0173 - 11478150-11478578,11478737-11478743,11481152-11481345 28 7.5
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 7.5
04_04_0498 - 25654988-25655168,25658149-25658257,25658376-256584... 27 9.9
03_05_0114 - 20970633-20970726,20971405-20971580 27 9.9
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 27 9.9
>07_03_0080 + 13193001-13193312
Length = 103
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 306 PHASSYQCPICESTFVNTSDLEVHVNVDHKD 398
P AS Y+C C+ F N L H+N+ KD
Sbjct: 12 PAASYYECTFCKRGFTNAQALGGHMNIHRKD 42
>11_06_0176 +
20929629-20929791,20929918-20930333,20930449-20930736,
20931034-20931147,20931245-20931352,20931701-20931744,
20933106-20933200,20934103-20934182,20934278-20934391,
20934476-20934628,20934740-20934832
Length = 555
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 285 TMAMSPGPHASSYQCPICESTFVNTSDLEVHVNVDHK 395
T+AM+ G +A + +C +C + F+ SDLE H H+
Sbjct: 518 TIAMASGKNAGT-KCNLCNARFLKDSDLEFHRRYYHQ 553
>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
Length = 431
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 321 YQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDNASCDDIVMMEESPVSNCPVC 494
+ CP C+ FV LE+H + H + DD N +I+ N PVC
Sbjct: 194 FSCPDCDEVFVKPDSLELHRSTRHA-VSELGADDTSRNIV--EIIFQSSWLKKNAPVC 248
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 312 ASSYQCPICESTFVNTSDLEVHVNV-DHK-DILSPQKDDQIDNASCDDIVMMEESPVSNC 485
A++ C +C++ F SDL+ H+ V H+ ++ +P D ++ + + +E C
Sbjct: 215 AATLICRVCQAKFTCQSDLQSHLKVMKHQLNLRAPSSDGSSFTSATSESLSLELYSCKVC 274
Query: 486 PVCC 497
V C
Sbjct: 275 SVKC 278
>07_03_1681 +
28624899-28625075,28625224-28625400,28625508-28625673,
28625761-28626152
Length = 303
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 67 NFSDQIYNETLKLQCLLCDFKSTCPRKL-EEHINRAHFDLTSPS 195
NF D++YNET K+ CPR N A D T+P+
Sbjct: 185 NFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPN 228
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 67 NFSDQIYNETLKLQCLLCDFKSTCPRKL-EEHINRAHFDLTSPS 195
NF D++YNET K++CPR N A D T+P+
Sbjct: 174 NFRDRLYNETNIDAAFAAALKASCPRPTGSGDGNLAPLDTTTPT 217
>06_03_1342 + 29461083-29461365,29461991-29462029,29462257-29462285
Length = 116
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 288 MAMSPGPHASSYQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDN 434
+ G HA +CP+C++T + +++H H + P + D+++N
Sbjct: 37 LGQDKGGHAK-LECPLCKTTAPDIKSMQIHHEARHPKL--PFEPDKLNN 82
>06_01_0393 +
2831676-2831876,2831986-2832101,2832340-2832421,
2832515-2832671,2832755-2832848,2833942-2834008,
2834464-2835009
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 278 QSRVLQGYVGLDKPRVGLSELAFAFAFKDGDVKSK-CARFICSSSF 144
++++ + G D PR L E F F +SK CA+ IC+ F
Sbjct: 42 EAKLAPCFPGSDDPRADLEECPICFLFYPSLNRSKCCAKGICTGEF 87
>02_05_0367 -
28331479-28332358,28332432-28332988,28333454-28333671,
28333748-28333831,28334199-28334373,28334572-28334574
Length = 638
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 227 IRPWACPTRHNPGEPYSGPDNG 292
IRP C T H P EP+SG + G
Sbjct: 174 IRPVGCGTEHVPCEPHSGAELG 195
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 302 R*HSHCQGQSRVLQGYVGLDKPRVGLSELAFAFAFKDGDVKSKCARFICSS--SFRGHVD 129
R H+H G+ + + Y G DK + S+L F G+ C C +F +
Sbjct: 61 RKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFN 120
Query: 128 LKSHRR 111
LK+H +
Sbjct: 121 LKAHMK 126
>07_03_1680 +
28620244-28620480,28620556-28620732,28620819-28620984,
28621099-28621493
Length = 324
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 67 NFSDQIYNETLKLQCLLCDFKSTCPRKL-EEHINRAHFDLTSPS 195
NF D+IYNET ++ CPR N A D T+P+
Sbjct: 205 NFRDRIYNETNIDSAFATQRQANCPRPTGSGDSNLAPLDTTTPN 248
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 252 DITLENPTLALTMAMSPGPHASSYQCPICESTF 350
D TL+ A+ A+ P P +++C C+S+F
Sbjct: 245 DATLDMLQSAIQNAIGPAPKKRTFRCQTCKSSF 277
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 312 ASSYQCPICESTFVNTSDLEVHV 380
A+ + CP+C TF ++L++H+
Sbjct: 160 ATQFSCPVCRKTFNRYNNLQMHM 182
>10_06_0173 - 11478150-11478578,11478737-11478743,11481152-11481345
Length = 209
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 312 ASSYQCPICESTFVNTSDLEVHVNVDHK---DILSPQKDDQIDN 434
A+SYQ P+ +T S++ + +N+D + +I ++DD +N
Sbjct: 126 ATSYQMPLYHTTTEVLSEINIRINLDGQCNINITKIEQDDDTEN 169
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 206 FAFKDGDVKSKCARFICSSSFRGHVDLKSHRRHC 105
F+ K G+ K KC + CS + H D K+H + C
Sbjct: 142 FSRKHGEKKWKCDK--CSKRYAVHSDWKAHSKVC 173
>04_04_0498 -
25654988-25655168,25658149-25658257,25658376-25658478,
25658634-25658883,25659011-25659126,25659332-25659587,
25659713-25659800,25659951-25660025,25660143-25660218,
25660308-25660366,25660972-25661038,25668502-25668810
Length = 562
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 533 VVSIHVVTGQWLTANRTIANWTLFHH 456
VVS V+ G +L N++++NW +F H
Sbjct: 99 VVS-QVIEGAYLEGNKSLSNWDVFTH 123
>03_05_0114 - 20970633-20970726,20971405-20971580
Length = 89
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 236 WACPTRHNPGEPYSGPDNGYVTWTSCFII 322
WA R + G P+S P TWT F +
Sbjct: 8 WARAYRGDSGVPHSDPQRLVTTWTGAFAL 36
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 318 SYQCPICESTFVNTSDL 368
SY CP C+ST NT L
Sbjct: 1427 SYMCPSCKSTLTNTMSL 1443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,314,352
Number of Sequences: 37544
Number of extensions: 359802
Number of successful extensions: 966
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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