Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021736
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.098
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   0.23 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   0.91 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   0.91 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    26   1.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.6  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.9  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   8.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 0.098
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 318  SYQCPICESTFVNTSDLEVHVNVDHKDI 401
            S++CP+C   F    +++ H  V H ++
Sbjct: 922  SHECPVCGQKFTRRDNMKAHCKVKHPEL 949


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 321 YQCPICESTFVNTSDLEVHVNVDH 392
           ++CP+C +T+  + +L  H    H
Sbjct: 524 FECPLCRATYTRSDNLRTHCKFKH 547


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 327 CPICESTFVNTSDLEVHVNVDHKDILSPQK 416
           CP C +++     L  H+ + H D L+  K
Sbjct: 553 CPYCPASYSRIDTLRSHLRIKHADRLNAPK 582


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 327 CPICESTFVNTSDLEVHVNVDHKDILSPQK 416
           CP C +++     L  H+ + H D L+  K
Sbjct: 529 CPYCPASYSRIDTLRSHLRIKHADRLNAPK 558


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 263 GEPYSGPDNGYVTWTSCFIIPMPD-LRKYIREHVRSGGPRE 382
           GEP   PD    T T   ++ +P+ +     EH +SG  R+
Sbjct: 145 GEPPPKPDRRITTTTQQIVVKLPETVANVSLEHQQSGAGRD 185


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 321 YQCPICESTFVNTSDLEVHVNVDH 392
           +QC +C +T    +DL +HV   H
Sbjct: 298 FQCKLCPTTCGRKTDLRIHVQNLH 321



 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 294 MSPGPHASSYQCPICESTFVNTSDLEVHV 380
           ++P P A ++ CP C+  F +  +L  H+
Sbjct: 411 VAPTPKAKTHICPTCKRPFRHKGNLIRHM 439



 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 321 YQCPICESTFVNTSDLEVHVN 383
           ++C +CE  F   + L+ HVN
Sbjct: 155 HKCVVCERGFKTLASLQNHVN 175



 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 321 YQCPICESTFVNTSDLEVHVNVDHK-DILSP 410
           Y+C  C  TF     L+ H+N  H  D ++P
Sbjct: 383 YKCDQCAQTFRQKQLLKRHMNYYHNPDYVAP 413



 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 321 YQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDNASCD 446
           ++C  C++ F  + +L  H+   H     P K  + D AS +
Sbjct: 183 HRCKHCDNCFTTSGELIRHIRYRHTH-ERPHKCTECDYASVE 223


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 309 HASSYQCPICESTFVNTSDLEVH 377
           HASS  CP C S   +T  +  H
Sbjct: 902 HASSPDCPACVSIVESTEHVLFH 924


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 282 LTMAMSPGPHASSYQCPICESTFVNTSDLEVH 377
           L  A +P  H   Y+CP C + FV  ++   H
Sbjct: 280 LDTAAAPTNH-HLYRCPACGNLFVELTNFYNH 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,519
Number of Sequences: 2352
Number of extensions: 15320
Number of successful extensions: 250
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)