Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021736
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 40 0.002
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 40 0.002
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 40 0.002
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 32 0.41
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 31 0.54
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 31 0.54
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 31 0.54
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 31 0.54
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 31 0.54
AY390553-1|AAQ94965.1| 239|Caenorhabditis elegans SMA-9 protein. 31 0.54
AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class I... 31 0.54
AY390540-1|AAQ94952.1| 405|Caenorhabditis elegans SMA-9 class I... 31 0.54
AY390539-1|AAQ94951.1| 465|Caenorhabditis elegans SMA-9 class I... 31 0.54
AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class I... 31 0.54
Z29443-2|CAA82581.1| 648|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z29443-1|CAA82576.1| 649|Caenorhabditis elegans Hypothetical pr... 31 0.95
U23515-11|ABB51179.1| 226|Caenorhabditis elegans Hypothetical p... 31 0.95
L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical pr... 29 2.9
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 29 3.8
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 29 3.8
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 29 3.8
L14745-9|AAK71355.2| 380|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical ... 28 5.1
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 28 6.7
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 28 6.7
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 28 6.7
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 28 6.7
AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally sym... 28 6.7
AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally sym... 28 6.7
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 8.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 8.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.9
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 27 8.9
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 27 8.9
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 27 8.9
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 270 PTLALTMAMSPGPHASSYQCPICESTFVNTSDLEVHVNVDHKDILSPQK 416
PT A + A + +S QCPIC+ F+N +L VH+ + P +
Sbjct: 394 PTSAASAAAAVAQIQASQQCPICQQRFLNAGELAVHITEHRNSLTQPPR 442
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 270 PTLALTMAMSPGPHASSYQCPICESTFVNTSDLEVHVNVDHKDILSPQK 416
PT A + A + +S QCPIC+ F+N +L VH+ + P +
Sbjct: 365 PTSAASAAAAVAQIQASQQCPICQQRFLNAGELAVHITEHRNSLTQPPR 413
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 270 PTLALTMAMSPGPHASSYQCPICESTFVNTSDLEVHVNVDHKDILSPQK 416
PT A + A + +S QCPIC+ F+N +L VH+ + P +
Sbjct: 394 PTSAASAAAAVAQIQASQQCPICQQRFLNAGELAVHITEHRNSLTQPPR 442
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.41
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +1
Query: 55 NSKLNFSDQIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
++ + ++++ LK +C +CDF+++ ++EEH H
Sbjct: 356 DTAVTIHERVHTGILKFECTVCDFRASRYLQMEEHTKEHH 395
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 210 EC*LRQSDPGLVQPDITLENPTLALTM-AMSPGPHASSYQCPICESTFVNTSDLEVHVNV 386
+C +RQ PD+ + P +L++ + S ++C +C++ F S LE H+
Sbjct: 75 KCIVRQKQQDFCAPDLNMV-PASSLSIDEIRNAVRKSMFRCKVCKNRFGEMSLLERHLRD 133
Query: 387 DH 392
H
Sbjct: 134 SH 135
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 246 QPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEVH 377
+P +T P LA +A P P + YQCP C N +L+ H
Sbjct: 293 EPLLTGSLPQLA-PLAPLPPPKSGVYQCPNCNRNLANARNLQRH 335
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 1928 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 1958
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 1910 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 1940
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 1963 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 1993
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 1996 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 2026
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 1554 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 1584
>AY390553-1|AAQ94965.1| 239|Caenorhabditis elegans SMA-9 protein.
Length = 239
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 101 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 131
>AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class Ib
protein.
Length = 521
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 383 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 413
>AY390540-1|AAQ94952.1| 405|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 267 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 297
>AY390539-1|AAQ94951.1| 465|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 465
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 327 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 357
>AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 591
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 300 PGPHASSYQCPICESTFVNTSDLEVHVNVDH 392
P P + +C IC F +L+VH++VDH
Sbjct: 453 PRPIPDNTKCQICADEFSTPIELQVHLHVDH 483
>Z29443-2|CAA82581.1| 648|Caenorhabditis elegans Hypothetical
protein T07C4.3b protein.
Length = 648
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 315 SSYQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDNASCDDIVMMEESPV 476
S P+ + V+ S +E+ +V +D + DQ+D+A D++++EE+ V
Sbjct: 215 SENSSPVEDKDEVDGSKMEMEDDVFEEDQRIAAESDQVDSAMVADVIIVEEAKV 268
>Z29443-1|CAA82576.1| 649|Caenorhabditis elegans Hypothetical
protein T07C4.3a protein.
Length = 649
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 315 SSYQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDNASCDDIVMMEESPV 476
S P+ + V+ S +E+ +V +D + DQ+D+A D++++EE+ V
Sbjct: 216 SENSSPVEDKDEVDGSKMEMEDDVFEEDQRIAAESDQVDSAMVADVIIVEEAKV 269
>U23515-11|ABB51179.1| 226|Caenorhabditis elegans Hypothetical
protein R144.3 protein.
Length = 226
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 37 IRQLAFNSKLNFSDQIYNETLKLQCLLCDFKSTCPRKLEEHINRAHFDL 183
I LAF+ D + E+ L CLLC K T R+ H++ AH ++
Sbjct: 113 IEVLAFHVSYAHQDVMSAESNNLTCLLCGKKWTTVRRKIMHLSLAHREI 161
>L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical
protein ZK686.5 protein.
Length = 202
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 303 GPHASSY-QCPICESTFVNTSDLEVHVNVDH 392
GP+A Y QC +C+ F + L H +V H
Sbjct: 162 GPNAKIYVQCELCDRQFKDKQSLRTHWDVSH 192
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 336 CESTFVNTSDLEVHVNVDHK 395
CE F T+DLE H++ +HK
Sbjct: 437 CEKRFQKTTDLEYHISKNHK 456
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 336 CESTFVNTSDLEVHVNVDHK 395
CE F T+DLE H++ +HK
Sbjct: 419 CEKRFQKTTDLEYHISKNHK 438
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 336 CESTFVNTSDLEVHVNVDHK 395
CE F T+DLE H++ +HK
Sbjct: 419 CEKRFQKTTDLEYHISKNHK 438
>L14745-9|AAK71355.2| 380|Caenorhabditis elegans Hypothetical
protein C02F5.12 protein.
Length = 380
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 61 KLNFSDQ-IYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
KL D + + K+ C LC F+ T R++ H +AH
Sbjct: 256 KLRLLDHALTHSNRKIPCKLCGFECTNVRRMRSHYAKAH 294
>AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical
protein Y5F2A.4 protein.
Length = 454
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 318 SYQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDNASCD 446
+Y C CE FV S L HV+ H S ++D +CD
Sbjct: 70 NYSCTFCEEKFVQKSHLTRHVSRKH----SNAPGVEVDWTACD 108
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 297 SPGPHASSYQCPICESTFVNTSDLEVHVNVDHK 395
S P+ ++ CPIC+ F+ +S LE H + K
Sbjct: 13 SADPNEPTFPCPICDRRFIKSS-LEKHESACRK 44
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.7
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = +1
Query: 79 QIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
++++++ + +C +C P +L +HI R H
Sbjct: 260 RVHSQSNRFECTICHKSYPVPSELRKHIKRVH 291
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.7
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = +1
Query: 79 QIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
++++++ + +C +C P +L +HI R H
Sbjct: 378 RVHSQSNRFECTICHKSYPVPSELRKHIKRVH 409
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 91 ETLKLQCLLCD--FKSTCPRKLEEHINRAHFD 180
ETLK+Q LCD F C K E RA +D
Sbjct: 118 ETLKIQVPLCDNVFDKECEGKTEIPFTRAKYD 149
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 91 ETLKLQCLLCD--FKSTCPRKLEEHINRAHFD 180
ETLK+Q LCD F C K E RA +D
Sbjct: 118 ETLKIQVPLCDNVFDKECEGKTEIPFTRAKYD 149
>AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform b protein.
Length = 339
Score = 27.9 bits (59), Expect = 6.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 318 SYQCPICESTFVNTSDLEVHVNVDHKD 398
++ CP+C+S F+ D H ++H++
Sbjct: 237 THDCPVCKSQFMTRMDCVSHHTLEHEN 263
>AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform a protein.
Length = 365
Score = 27.9 bits (59), Expect = 6.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 318 SYQCPICESTFVNTSDLEVHVNVDHKD 398
++ CP+C+S F+ D H ++H++
Sbjct: 263 THDCPVCKSQFMTRMDCVSHHTLEHEN 289
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1494 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1553
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1554 QEVHVPSEPSPMEEEVKLETSPV 1576
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1785 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1844
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1845 QEVHVPSEPSPMEEEVKLETSPV 1867
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1800 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1859
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1860 QEVHVPSEPSPMEEEVKLETSPV 1882
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1604 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1663
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1664 QEVHVPSEPSPMEEEVKLETSPV 1686
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1494 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1553
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1554 QEVHVPSEPSPMEEEVKLETSPV 1576
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1785 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1844
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1845 QEVHVPSEPSPMEEEVKLETSPV 1867
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1800 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1859
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1860 QEVHVPSEPSPMEEEVKLETSPV 1882
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 DPGLVQPDITLENPTLALTMAMSPGPHASSYQCPICESTFVNTSDLEV-HVNVDHKDILS 407
DP ++P L N L + S HAS Q E S+L V V + +++
Sbjct: 1604 DPHNIKPTEPLNNGHTDLLFSPSSSAHASEKQSTKSEDDMEEDSELVVMEKEVPMEQVIA 1663
Query: 408 PQKDDQIDNASCDDIVMMEESPV 476
+ + + ++ V +E SPV
Sbjct: 1664 QEVHVPSEPSPMEEEVKLETSPV 1686
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 58 SKLNFSDQIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
SK +F+ + N QC +CD+ S +L++H+ +H
Sbjct: 325 SKFHFNSHM-NTHGDHQCSMCDYTSRTEGRLKKHMRESH 362
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 58 SKLNFSDQIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
SK +F+ + N QC +CD+ S +L++H+ +H
Sbjct: 347 SKFHFNSHM-NTHGDHQCSMCDYTSRTEGRLKKHMRESH 384
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 76 DQIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
++++ +K +C +CDF++ +EEH H
Sbjct: 461 ERMHTGIIKFECKVCDFRANRYTAMEEHKRDEH 493
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 58 SKLNFSDQIYNETLKLQCLLCDFKSTCPRKLEEHINRAH 174
SK +F+ + N QC +CD+ S +L++H+ +H
Sbjct: 347 SKFHFNSHM-NTHGDHQCSMCDYTSRTEGRLKKHMRESH 384
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/76 (22%), Positives = 29/76 (38%)
Frame = +3
Query: 294 MSPGPHASSYQCPICESTFVNTSDLEVHVNVDHKDILSPQKDDQIDNASCDDIVMMEESP 473
M H Y+C C + F+N + H H + + + +NA+ + + E
Sbjct: 118 MQQHAHEKPYKCSFCTAEFLNVYEKNEH-EEQHMHHPNHGETMEENNATTSQFIQVAEPT 176
Query: 474 VSNCPVCCQPLPCHNM 521
+ P CQ C M
Sbjct: 177 IQAEP--CQIYECSEM 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,080,466
Number of Sequences: 27780
Number of extensions: 324359
Number of successful extensions: 1226
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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