Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021735
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192... 94 9e-20
04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191... 92 5e-19
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178... 31 0.69
11_04_0265 + 15541329-15541568,15541653-15541901,15542172-155423... 29 2.8
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 29 2.8
03_03_0050 - 14086954-14087079,14087152-14088045 29 2.8
12_02_0306 + 17307166-17309091 29 3.7
09_02_0412 - 8731559-8731651,8731729-8731762,8732250-8732501,873... 29 3.7
03_04_0095 + 17266595-17266741,17267235-17267807 29 3.7
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 29 4.9
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 29 4.9
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47... 29 4.9
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 29 4.9
01_05_0137 + 18492866-18493105,18493191-18493481,18494006-184942... 29 4.9
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239... 29 4.9
08_02_1241 - 25511462-25511614,25511690-25512499 28 6.4
08_02_0746 + 20721421-20721649,20722912-20722971,20723318-207233... 28 6.4
04_01_0601 + 7918220-7918559,7919082-7919158 28 6.4
03_02_0886 - 12173913-12174065,12174140-12174685 28 6.4
11_01_0596 + 4755453-4755490,4755675-4756047,4757739-4758940,475... 28 8.5
06_01_1195 + 10280864-10280979,10281024-10281115,10281211-102821... 28 8.5
05_03_0384 - 13361999-13362120,13362241-13362252,13362921-133629... 28 8.5
05_03_0383 - 13352924-13353045,13353166-13353177,13353844-133539... 28 8.5
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 28 8.5
>10_08_0523 -
18518158-18518442,18518786-18518899,18518994-18519219,
18519364-18519470,18519809-18519964,18520100-18520210
Length = 332
Score = 94.3 bits (224), Expect = 9e-20
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +3
Query: 261 CQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDN 440
CQ MD PG+VPM ++ F E+E IQN+K+LQ F K+ + K + ++KL KGR DN
Sbjct: 45 CQLMDAAHPGAVPMHKVNFDAKTEYEMIQNYKVLQDVFNKLKITKHIEVNKLTKGRPLDN 104
Query: 441 FEFLQWFKKFFDANYGG--AAYDAVRRRRSAHGARGLGR 551
EF+QW K++ D+ GG +Y+A RR S+ G + R
Sbjct: 105 LEFMQWMKRYCDSVNGGFMNSYNASERRESSKGGKETNR 143
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 172 LSRHDMLAWVNDCLQSNFAKIEELCTGA 255
+ R+++LAW+N LQ +K+EE +GA
Sbjct: 15 VGRNEILAWINTTLQLGLSKVEEAASGA 42
>04_04_1332 +
32718584-32718706,32718892-32718960,32719069-32719155,
32719865-32719971,32720066-32720187,32720462-32720535,
32720833-32720946,32721100-32721213
Length = 269
Score = 91.9 bits (218), Expect = 5e-19
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Frame = +3
Query: 261 CQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDN 440
CQ MDM+ PG VPM ++ F E++ IQN+KILQ F K+ + K + ++KLVKGR DN
Sbjct: 49 CQLMDMVHPGVVPMHKVNFDAKTEYDMIQNYKILQDVFNKLRLSKNIEVNKLVKGRPLDN 108
Query: 441 FEFLQWFKKFFDANYGGAA---YDAVRRRRSAHGARGL 545
EFLQW K++ D+ GG Y+ V RR R L
Sbjct: 109 LEFLQWLKRYCDSVNGGIMNENYNPVERRSKGCKERSL 146
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 172 LSRHDMLAWVNDCLQSNFAKIEELCTGA 255
+ R ++L+W+N LQ + AK+EE +GA
Sbjct: 19 VGRGEILSWINATLQLSLAKVEEAASGA 46
>03_05_0226 - 22115285-22115404,22115477-22116661,22117037-22117861,
22118029-22118106,22118370-22118420,22118510-22118581,
22118666-22118667,22119453-22119557,22119668-22119749,
22120178-22120227,22120514-22120567,22121084-22121164,
22121567-22121656,22121884-22121964,22122304-22122544
Length = 1038
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 243 VYRCAYCQFMDMLFPGSVPMKRIKF 317
VY C+YCQ D FP + P+K I+F
Sbjct: 960 VYHCSYCQRTDHTFP-TCPLKHIEF 983
>11_04_0265 +
15541329-15541568,15541653-15541901,15542172-15542321,
15542427-15542901,15543132-15543445,15543875-15543973,
15544567-15544659,15544737-15544922
Length = 601
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+G P H + +K W++ F H R+ + D
Sbjct: 235 REKDVLSTALGTPEHGGRVRGVSSKMSWKEGFKHDPHKTREAYKD 279
>04_03_0659 - 18453778-18453903,18453976-18454963,18455496-18456229,
18456292-18456360,18456528-18456605,18456703-18456789,
18456881-18456931,18457021-18457092,18457177-18457304,
18458194-18458275,18458705-18458754,18459043-18459096,
18459586-18459675,18459903-18459983,18460443-18460538,
18460960-18461022,18461313-18461402,18461630-18461698,
18462051-18462291
Length = 1082
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 243 VYRCAYCQFMDMLFPGSVPMKRIKF 317
VY C++CQ D FP + P+K I+F
Sbjct: 1002 VYHCSHCQRTDHTFP-TCPLKHIEF 1025
>03_03_0050 - 14086954-14087079,14087152-14088045
Length = 339
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 243 VYRCAYCQFMDMLFPGSVPMKRIKF 317
VY C++CQ D FP + P+K I+F
Sbjct: 259 VYHCSHCQRTDHTFP-TCPLKHIEF 282
>12_02_0306 + 17307166-17309091
Length = 641
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 618 GLGSSCDFGDRGDGFLSGSGPRGG 547
G G C GDG L G G RGG
Sbjct: 68 GAGVGCSLTGGGDGILCGGGARGG 91
>09_02_0412 -
8731559-8731651,8731729-8731762,8732250-8732501,
8732585-8733996
Length = 596
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+ P H + +K W++ F H R+ F D
Sbjct: 36 REKDVLSTALSTPEHRGRVRGVSSKMSWKEGFKHDPYKTRETFKD 80
>03_04_0095 + 17266595-17266741,17267235-17267807
Length = 239
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Frame = -3
Query: 594 GDRGDGFLSGSGPRGGRAPVPHGQTFSCALRHM--------PHLHSWRQR 469
G G G G GPR V G+T SCA +H+ P H W QR
Sbjct: 168 GGSGSGVFIGGGPR----EVAQGETSSCARQHLLDGQRRREPKRHLWWQR 213
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V +G P H + +K W++ F H RD + D
Sbjct: 338 REKDVLSTVLGTPEHGGRVRGVSSKMSWKEGFKHDPHKKRDAYKD 382
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+G P H + +K W++ F H R+ + D
Sbjct: 187 REKDVLSTALGTPEHGGRVQGVSSKMSWKEGFKHDPHKKREAYKD 231
>09_01_0027 -
469856-470773,470780-471261,471296-471408,471453-472003,
472089-472328
Length = 767
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+G P H + +K W++ F H R+ + D
Sbjct: 334 REKDVLSTALGTPEHGGRVRGVSSKMSWKEGFKHDPHKKREAYKD 378
>07_03_0316 +
16684100-16684339,16684425-16685132,16685241-16685939,
16685992-16686053,16686096-16686368,16686622-16686873,
16686954-16687064,16687152-16687212,16687312-16687404,
16687482-16687667
Length = 894
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+G P H + +K W++ F H R+ + D
Sbjct: 324 REKDVLSTALGTPEHGGRVRGVSSKMSWKEGFKHDPHKKREAYKD 368
>01_05_0137 +
18492866-18493105,18493191-18493481,18494006-18494208,
18494308-18494512,18494525-18494743,18494748-18495085,
18495408-18495669,18496339-18496524
Length = 647
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+G P H + +K W++ F H R+ + D
Sbjct: 186 REKDVLSTALGTPEHGGRVREVTSKMSWKEGFKHDPHKKREAYKD 230
>01_03_0093 -
12422558-12422607,12422679-12422935,12423565-12423932,
12423939-12424800,12425247-12425464
Length = 584
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 287 REQHVHELAIGAPVHNS---SIFAKFDWRQSFTHASISCRDRFSD 162
RE+ V A+G P H + +K W++ F H R+ + D
Sbjct: 232 REKDVLSTALGTPEHGGRVRGVSSKMSWKEGFKHDPHKKREAYKD 276
>08_02_1241 - 25511462-25511614,25511690-25512499
Length = 320
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 234 RRVVYRCAYCQFMDMLFPGSVPMKRIKF 317
++ +Y C++CQ D FP + P+K ++F
Sbjct: 228 QKELYHCSHCQRTDHTFP-TCPLKHVEF 254
>08_02_0746 +
20721421-20721649,20722912-20722971,20723318-20723377,
20723458-20723553,20723764-20723871,20724037-20724090,
20724275-20724414,20724499-20724570,20724642-20724692,
20724943-20725017,20725205-20725585,20726372-20727604,
20727679-20727831
Length = 903
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 234 RRVVYRCAYCQFMDMLFPGSVPMKRIKF 317
++ +Y C++CQ D FP + P+K ++F
Sbjct: 811 QKELYHCSHCQRTDHTFP-TCPLKHVEF 837
>04_01_0601 + 7918220-7918559,7919082-7919158
Length = 138
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 651 WRSDCCISFPNGLGSSCDFGDRGDGFLSGSGPRGGRAPVPHG 526
WR + G G D GD GDG +G GGR V G
Sbjct: 70 WRGGGEVRAVEGEGEGEDGGDGGDGEQAGGESAGGRRVVGGG 111
>03_02_0886 - 12173913-12174065,12174140-12174685
Length = 232
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 234 RRVVYRCAYCQFMDMLFPGSVPMKRIKF 317
++ +Y C++CQ D FP + P+K ++F
Sbjct: 140 QKELYHCSHCQRTDHTFP-TCPLKHVEF 166
>11_01_0596 +
4755453-4755490,4755675-4756047,4757739-4758940,
4759026-4759392
Length = 659
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 450 LQWFKKFFDANYGGAAYDAVRRRRS 524
++W+K FDAN G YDA ++R S
Sbjct: 437 IEWYKALFDANTG--YYDAFKQRLS 459
>06_01_1195 +
10280864-10280979,10281024-10281115,10281211-10282156,
10282378-10283075,10283140-10284068
Length = 926
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 654 WWRSDCCISFPNGLGS 607
WWRS +S P G+GS
Sbjct: 625 WWRSSARVSVPKGIGS 640
>05_03_0384 -
13361999-13362120,13362241-13362252,13362921-13362981,
13363049-13363202,13364653-13364788,13365020-13365290,
13365654-13365962
Length = 354
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 488 SIVGVKEFLEP-LQKLKIILETTLHQFVNGYYLVHTHLFKTSL 363
S++G + P + +LK+ ++ TLH+ + LVH LF+ ++
Sbjct: 151 SLIGTMSGIIPYMNQLKVFVDVTLHRMMLMKLLVHHDLFELAV 193
>05_03_0383 -
13352924-13353045,13353166-13353177,13353844-13353904,
13353972-13354125,13355576-13355711,13355943-13356138
Length = 226
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 488 SIVGVKEFLEP-LQKLKIILETTLHQFVNGYYLVHTHLFKTSL 363
S++G + P + +LK+ ++ TLH+ + LVH LF+ ++
Sbjct: 23 SLIGTMSGIIPYMNQLKVFVDVTLHRMMLMKLLVHHDLFELAV 65
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 461 EPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLK-FDSF 303
E L+KLK +LET + YL L L +F + FM C FD++
Sbjct: 138 ESLEKLKKVLETYEARLSGSRYLAGDFLSFADLNHFPFTFYFMATPCASLFDAY 191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,058,878
Number of Sequences: 37544
Number of extensions: 449053
Number of successful extensions: 1320
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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