Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021734
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    29   0.19 
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   1.8  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           25   1.8  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           25   1.8  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           25   1.8  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           25   1.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   3.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   5.4  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   7.2  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   9.5  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +3

Query: 567 PASSADRG----RGQTGEE**AGSLEDPREPGHPARQSGFGSAHAG*PGRLQDR 716
           P  S ++G    RGQ GE    G    P +PG   R   FG    G PG+  DR
Sbjct: 316 PGRSGEKGQAGDRGQVGERGHKGEKGLPGQPGPRGRDGNFGP--VGLPGQKGDR 367



 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 679 DPKPDCRAGCPGSRGSSRLPAHH 611
           +P P   AG PG++G    PA H
Sbjct: 197 NPGPRGYAGIPGTKGEKGEPARH 219


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 431 TGNITRESIVDVEASVVRTAAPVESCQLRTWNWWLIRYGRYRAPDPSF 574
           + N   + IVD E   +++A PVE  +LRT      +Y      +P F
Sbjct: 121 SNNSNSKDIVDFEVLKIKSALPVED-ELRTDTGISTKYDEIDDENPKF 167


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 157 HQWNQSLTSQK 189
           HQWNQ++T QK
Sbjct: 93  HQWNQTITEQK 103


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 157 HQWNQSLTSQK 189
           HQWNQ++T QK
Sbjct: 93  HQWNQTITEQK 103


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 157 HQWNQSLTSQK 189
           HQWNQ++T QK
Sbjct: 93  HQWNQTITEQK 103


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 157 HQWNQSLTSQK 189
           HQWNQ++T QK
Sbjct: 93  HQWNQTITEQK 103


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 634 SSRLPAHHSSPVWPRPRSAEEAGIWR 557
           ++R+ AH     W R R AEEA + R
Sbjct: 408 AARMQAHLDEIEWQRQREAEEAVLTR 433


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 516 GRGTGGSSDMDGIERQIPASSADRGRGQ 599
           G G GG   +DG    IP+   DR RG+
Sbjct: 250 GGGGGGGMQLDGRGNAIPSMVVDR-RGE 276


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 627 LEDPREPGHPARQSGFGSAH 686
           +EDP  PG+   +S +G+ H
Sbjct: 508 IEDPLTPGNDIGRSSYGALH 527


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 511 LARFDWGGRPHDRSLHVDYRLSRDVAGEFDHLFADLPLLVNANQQLNCARGLP 353
           L+R  + G P    L +       V G+   LFADLP L      +N  R LP
Sbjct: 245 LSRAAFAGVPELERLDLSSNQLESVPGD---LFADLPHLTELAMGVNNFRTLP 294


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 472 FGREDGRPSRI 504
           FG+ED RPSRI
Sbjct: 688 FGQEDARPSRI 698


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 EDQQTDGQIHRQHHERVDSRRGG 471
           + QQ   Q+H  HH   ++  GG
Sbjct: 151 QQQQQQQQLHHHHHHHHNAPAGG 173


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -3

Query: 234 DVPLTIGSFSYSHKVLLRSQALIPLMAELMKPYARLSFVVSQR 106
           D    +G     H+V+     +  L   L  P  R+SF  ++R
Sbjct: 77  DTYFQVGPLQAFHRVITMENFMKTLAPSLWPPAERISFCYTER 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,389
Number of Sequences: 2352
Number of extensions: 13482
Number of successful extensions: 50
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)