Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021732
(661 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 173 4e-42
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 61 3e-08
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 58 1e-07
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 55 2e-06
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 54 2e-06
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 51 3e-05
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 49 9e-05
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 49 1e-04
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 45 0.001
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 44 0.002
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 44 0.002
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 40 0.040
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 40 0.070
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 37 0.37
UniRef50_Q39HG4 Cluster: Transcriptional regulator, LysR family;... 35 2.0
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 34 2.6
UniRef50_Q6A564 Cluster: Cellulosomal anchoring scaffoldin B pre... 34 3.5
UniRef50_A6S4A8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_UPI000065FE71 Cluster: Homolog of Homo sapiens "ETS dom... 33 4.6
UniRef50_Q6WGM0 Cluster: Attachment glycoprotein; n=1; Mossman v... 33 4.6
UniRef50_Q6CGV5 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 4.6
UniRef50_Q8TFG4 Cluster: Uncharacterized protein PB18E9.04c prec... 33 4.6
UniRef50_P10667 Cluster: Integumentary mucin A.1 precursor; n=1;... 33 4.6
UniRef50_UPI00006A03E9 Cluster: UPI00006A03E9 related cluster; n... 33 6.1
UniRef50_Q1GET5 Cluster: Extensin-like protein; n=4; Rhodobacter... 33 6.1
UniRef50_A0UP06 Cluster: Cell divisionFtsK/SpoIIIE; n=1; Burkhol... 33 6.1
UniRef50_A7QHY9 Cluster: Chromosome chr17 scaffold_101, whole ge... 33 6.1
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 33 6.1
UniRef50_UPI0000E0EF43 Cluster: putative periplasmic chaperone; ... 33 8.0
UniRef50_UPI0000EBDCE8 Cluster: PREDICTED: similar to glycoprote... 33 8.0
UniRef50_A5G353 Cluster: TonB-dependent receptor, plug precursor... 33 8.0
UniRef50_Q54RH9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 173 bits (420), Expect = 4e-42
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 255 ETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG 434
ETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG
Sbjct: 90 ETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG 149
Query: 435 VNVLATPSSARITIGGLALMHQATLP 512
NVLATPSSARIT+GGLALMHQATLP
Sbjct: 150 FNVLATPSSARITMGGLALMHQATLP 175
Score = 103 bits (247), Expect = 4e-21
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2
Query: 509 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASV 646
PCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASV
Sbjct: 175 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASV 220
Score = 99 bits (238), Expect = 5e-20
Identities = 54/86 (62%), Positives = 55/86 (63%)
Frame = +1
Query: 1 VPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXXXXXX 180
VPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 5 VPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAPPPPL 64
Query: 181 XXXXXXXXQRLIIPFQRLYFDLTGTK 258
QRLIIPFQRLYFDLTGT+
Sbjct: 65 GSSLGRSPQRLIIPFQRLYFDLTGTE 90
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/87 (37%), Positives = 46/87 (52%)
Frame = +3
Query: 255 ETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG 434
E+ S+++ S P V ++ + YR A L +LEA V P+A S P TVDLCWT VT
Sbjct: 81 ESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTVDLCWTIDSVTPAR 140
Query: 435 VNVLATPSSARITIGGLALMHQATLPA 515
+L+ + RI G + LPA
Sbjct: 141 SEILSVFGAQRIAWGSVHFSAPILLPA 167
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 509 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASV 646
P +L +NP IK + YT+ PRL F+++ V G A + S+
Sbjct: 166 PAELSSLNPTIKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSI 211
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 58.4 bits (135), Expect = 1e-07
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Frame = +3
Query: 189 PGTVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 368
P S D PF ET S+ + S P S+ Y A L +LE VFP
Sbjct: 62 PPLASPYVDLPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKN 121
Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNP 548
PS P++ D W ++ V++ G +L+T R+T GG ++ P I RS+NP
Sbjct: 122 PSYTYPMSFDAHWHSSSVSITGSQILSTYGGTRVTFGGPI---TSSNPIILPADLRSTNP 178
Query: 549 ----RFHTPTTPDLT-SISINPLTPY*KEFAPGLKPPLVIRG 659
TP LT + N P P + +VIRG
Sbjct: 179 VVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRG 220
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +3
Query: 294 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARIT 473
++S I YR A L L+A+V P+A S + P+T+DL W+T +V + +L R
Sbjct: 1845 SLSEITAPYRKARLAELKAIVCPTAASFQSPITLDLVWSTNNVIFTDLQILQVYGGTRFA 1904
Query: 474 IGGLALMHQATLPA 515
IGG L H L A
Sbjct: 1905 IGGPLLSHTYELRA 1918
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/98 (33%), Positives = 48/98 (48%)
Frame = +3
Query: 189 PGTVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 368
PG S + PF V E S +T+ S P ++ + YR A +V EAV+FP++
Sbjct: 25 PGQQSPSMVVPFQVSVSDLGVSEV-SAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNS 83
Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 482
S K PV DL W ++ + +L T R T+GG
Sbjct: 84 TSSKNPVHCDLIWVPSNSSASPKTILQTYGGNRFTVGG 121
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 264 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 443
S ++ + + P +++ + +R A L L AVV PSA S+ P+TV L W A T +
Sbjct: 60 SVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQLIWVPASSTTTSSQI 119
Query: 444 LATPSSARITIGG 482
L T +I++GG
Sbjct: 120 LGTYGGQQISVGG 132
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/98 (28%), Positives = 47/98 (47%)
Frame = +3
Query: 189 PGTVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 368
PG T PF + VL + + ++ S+T+ ++ +VS++ YR A L +L + P+
Sbjct: 24 PGPSPLTIKQPFQSEVLFAGTKDAEA-SLTIANIDSVSTLTTFYRHASLESLWVTIHPTL 82
Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 482
+ P TV +CW A+ V + T IGG
Sbjct: 83 QAPTFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGG 120
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 192 GTVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAP 371
G + + D+PF V E K+ S + ++ ++ YR A L ++E V P A
Sbjct: 2025 GLNAPSVDYPFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAA 2084
Query: 372 SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQAT-LPA 515
+ P++V WT A ++ + + T+GG LM T LPA
Sbjct: 2085 AFSKPISVSAVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPA 2133
Score = 33.1 bits (72), Expect = 6.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 494 ASSYPPCDLGYINPIIKSPIPYTNHPRLN 580
++++ P DL +NP++K P+ YT+ PR +
Sbjct: 2127 STTHLPADLTRLNPVLKGPVKYTDCPRFS 2155
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/98 (31%), Positives = 42/98 (42%)
Frame = +3
Query: 189 PGTVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 368
PG PF T L S S+SV++ + VSS+ YR A L +L A + P+
Sbjct: 28 PGNAPPVIKLPFQTK-LASLGTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNH 86
Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 482
S P TV L W + T ++L IGG
Sbjct: 87 LSPSNPTTVSLVWVPFNSTATSSDILNVFGGQSFCIGG 124
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 273 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 452
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 453 PSSARITIGG 482
R IGG
Sbjct: 112 YGGQRFLIGG 121
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +3
Query: 264 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 443
S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+ ++
Sbjct: 49 SSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPASPTDI 108
Query: 444 LATPSSARITIGG 482
L + T GG
Sbjct: 109 LKIYGGSSYTFGG 121
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 40.3 bits (90), Expect = 0.040
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 213 DHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVT 392
D PF V K + + ++S + GYR A L++ E P A + P++
Sbjct: 1907 DVPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPIS 1966
Query: 393 VDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQAT-LPA 515
V WT A + L +T+GG LM T +PA
Sbjct: 1967 VTAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVTRIPA 2008
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 39.5 bits (88), Expect = 0.070
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +3
Query: 327 AYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQAT 506
A + A++ P+A +L +P DL T D+T T + +T ALM AT
Sbjct: 544 ALMETATALMVPTATALMVPTATDLTTTATDLTTTATATDLTTTVTDLTTTATALMETAT 603
Query: 507 -LPAISATS-TRSSNPRFHTPTTPDLTSISINPLT 605
L +AT T + PT DLT ++ LT
Sbjct: 604 ALTVPTATDLTVPTATDLTVPTATDLTVPTVTDLT 638
Score = 39.1 bits (87), Expect = 0.093
Identities = 26/114 (22%), Positives = 52/114 (45%)
Frame = +3
Query: 264 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 443
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 444 LATPSSARITIGGLALMHQATLPAISATSTRSSNPRFHTPTTPDLTSISINPLT 605
+ T ++ + ALM AT + T+T P T P T++++ T
Sbjct: 722 METATALTVPT-ATALMETATALTV-PTATALMVPTATDLTVPTATALTVPTAT 773
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 37.1 bits (82), Expect = 0.37
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = +3
Query: 216 HPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 395
+PF + S E ++ V++ + +++ YR A L +L+A++ P+ + P +V
Sbjct: 33 YPFQFTIA-SLGVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPTSV 91
Query: 396 DLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNP 548
L W + T +L +GG +T P I + NP
Sbjct: 92 ALAWVPYNSTATAAKILDVFGGQEFCVGGSI---NSTSPIIVPCPLTNINP 139
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 509 PCDLGYINPIIKSPIPYTNHPRLNIH 586
PC L INPIIK + YT+ P+L I+
Sbjct: 131 PCPLTNINPIIKDSVTYTDTPKLLIY 156
>UniRef50_Q39HG4 Cluster: Transcriptional regulator, LysR family;
n=12; Proteobacteria|Rep: Transcriptional regulator,
LysR family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 290
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +3
Query: 450 TPSSARITIGGLALMHQATLPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAP 629
+P++AR+TIG +A + A LPA A R +P T P L+ +N + + A
Sbjct: 84 SPATARVTIGAIASVQSALLPAALADFHR-RHPACRTRVIPGLSIELVNRVDAGEIDMAA 142
Query: 630 GLKPPLVIR 656
++PP ++
Sbjct: 143 IIRPPFSLQ 151
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 294 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARI 470
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S +R+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_Q6A564 Cluster: Cellulosomal anchoring scaffoldin B
precursor; n=1; Bacteroides cellulosolvens|Rep:
Cellulosomal anchoring scaffoldin B precursor -
Bacteroides cellulosolvens
Length = 2299
Score = 33.9 bits (74), Expect = 3.5
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 6/124 (4%)
Frame = +3
Query: 255 ETKSNSVTVQSL-PNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 431
E + S+TV + P V+ + A + + PS+ IP T VT+
Sbjct: 1173 EFTNGSITVAATAPTVTPTVNATPSAATPTVTPTA-TATPSVTIPTVTPTATATPSVTIP 1231
Query: 432 GV--NVLATPSSARITIGGLA-LMHQATLPAI--SATSTRSSNPRFHTPTTPDLTSISIN 596
V ATPS+A T+ A T+P + + T+T S TPT S +
Sbjct: 1232 TVTPTATATPSAATPTVTPTATATPSVTIPTVTPTVTATPSDTIPTVTPTATATPSAIVT 1291
Query: 597 PLTP 608
+TP
Sbjct: 1292 TITP 1295
>UniRef50_A6S4A8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 684
Score = 33.9 bits (74), Expect = 3.5
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +3
Query: 348 AVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISAT 527
A V P S + P+ + AD G+ V TP+++ T+ ++ H +LP+++A
Sbjct: 394 AAVIPKELSAETPIELP-AELPADFFYGGITVDNTPTASP-TVSSISASHSGSLPSMNAL 451
Query: 528 STRSSNPRFH------TPTTPDLTSISINPLTPY*KEFAPGLKP 641
+ S+ P F TPT + + ++ ++ + + G P
Sbjct: 452 AISSAEPSFERGSESITPTRSSIVADQVSAISSVTRLRSEGFSP 495
>UniRef50_UPI000065FE71 Cluster: Homolog of Homo sapiens "ETS domain
transcription factor ERF; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "ETS domain transcription factor
ERF - Takifugu rubripes
Length = 803
Score = 33.5 bits (73), Expect = 4.6
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Frame = +3
Query: 195 TVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPS 374
T ST S V + H SNSV + N++ I ++ L ++ A V +A
Sbjct: 523 TTISTSSPALSDTVNTAANHFKSSNSVVISMNKNINKSIISSNNSKLPSV-ATVDSTATE 581
Query: 375 LKIPVTVDLCWTTADVTVE--GVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNP 548
V+++ + D + G N PSS R + A H A L AT +
Sbjct: 582 TNHLVSIENRTRSIDYHEKESGENETGAPSSVRSSSTDTASEHSADLDVNEATRSSQHQK 641
Query: 549 RFHTPTTPDLTS 584
F TP P+ S
Sbjct: 642 IFDTPDHPNSAS 653
>UniRef50_Q6WGM0 Cluster: Attachment glycoprotein; n=1; Mossman
virus|Rep: Attachment glycoprotein - Mossman virus
Length = 632
Score = 33.5 bits (73), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 453 PSSARITIGGLALMHQATLPAISATSTRSSNPRFHTPTTPDLTSIS 590
P R+T G +H+ + S ++ R+ NPR P+T +LTS++
Sbjct: 491 PIRGRVTFDGQVTLHEHSRTYDSLSNQRACNPRLGCPSTCELTSMA 536
>UniRef50_Q6CGV5 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 982
Score = 33.5 bits (73), Expect = 4.6
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 405 WTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATST---RSSNPRFHTPTTPD 575
WTT V +E L+TP S IT A + ++T PA S ST +S P P+T +
Sbjct: 101 WTTEVVVME---CLSTPVSVPITTTDPATIPESTEPATSTESTTSPETSPPISEEPSTSE 157
Query: 576 LTSISINPLT 605
+ S P+T
Sbjct: 158 EPTTSEKPIT 167
>UniRef50_Q8TFG4 Cluster: Uncharacterized protein PB18E9.04c
precursor; n=1; Schizosaccharomyces pombe|Rep:
Uncharacterized protein PB18E9.04c precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 800
Score = 33.5 bits (73), Expect = 4.6
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 4/139 (2%)
Frame = +3
Query: 189 PGTVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFP 362
P T +ST + P S T +N T S+P S+ + +V +
Sbjct: 400 PPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYT 459
Query: 363 SAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSS 542
S P P+T C T+ + V +TP + ++ + +T S + SS
Sbjct: 460 STPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSS 519
Query: 543 NPRFHTP--TTPDLTSISI 593
P TP TT TS S+
Sbjct: 520 TPVTSTPVTTTNCTTSTSV 538
>UniRef50_P10667 Cluster: Integumentary mucin A.1 precursor; n=1;
Xenopus laevis|Rep: Integumentary mucin A.1 precursor -
Xenopus laevis (African clawed frog)
Length = 400
Score = 33.5 bits (73), Expect = 4.6
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 345 EAVVFPSAP-SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAIS 521
E P+ P + +P T + TT T E V TP + + T+P
Sbjct: 132 ETTTVPTTPETTTVPTTPET--TTVPTTPETTTVPTTPETTTVP----TTPETTTVPTTP 185
Query: 522 ATSTRSSNPRFHT-PTTPDLTSISINPLT 605
T+T + P T PTTP+ T++ P T
Sbjct: 186 ETTTVPTTPETTTVPTTPETTTVPTTPET 214
Score = 33.5 bits (73), Expect = 4.6
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 345 EAVVFPSAP-SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAIS 521
E P+ P + +P T + TT T E V TP + + T+P
Sbjct: 141 ETTTVPTTPETTTVPTTPET--TTVPTTPETTTVPTTPETTTVP----TTPETTTVPTTP 194
Query: 522 ATSTRSSNPRFHT-PTTPDLTSISINPLT 605
T+T + P T PTTP+ T++ P T
Sbjct: 195 ETTTVPTTPETTTVPTTPETTTVPTTPET 223
Score = 33.5 bits (73), Expect = 4.6
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 345 EAVVFPSAP-SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAIS 521
E P+ P + +P T + TT T E V TP + + T+P
Sbjct: 150 ETTTVPTTPETTTVPTTPET--TTVPTTPETTTVPTTPETTTVP----TTPETTTVPTTP 203
Query: 522 ATSTRSSNPRFHT-PTTPDLTSISINPLT 605
T+T + P T PTTP+ T++ P T
Sbjct: 204 ETTTVPTTPETTTVPTTPETTTVPTTPET 232
Score = 33.1 bits (72), Expect = 6.1
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 408 TTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNPRFHT-PTTPDLTS 584
TTA T E V TP + + T+P T+T + P T PTTP+ T+
Sbjct: 125 TTASTTAETTTVPTTPETTTVP----TTPETTTVPTTPETTTVPTTPETTTVPTTPETTT 180
Query: 585 ISINPLT 605
+ P T
Sbjct: 181 VPTTPET 187
>UniRef50_UPI00006A03E9 Cluster: UPI00006A03E9 related cluster; n=2;
Euteleostomi|Rep: UPI00006A03E9 UniRef100 entry - Xenopus
tropicalis
Length = 2156
Score = 33.1 bits (72), Expect = 6.1
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 195 TVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPS 374
TV ST + ++ LR H+ + + S+P+ S+ + A EA PS+ +
Sbjct: 1813 TVPSTTETTKTSTQLRV--HQAATTTTETLSVPSTSTTVP--LTAESTTSEATTVPSSTT 1868
Query: 375 LKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNPRF 554
+ V + + T T+E T ++ T T S T+T +S+
Sbjct: 1869 SETTVPLTIETTQTSTTIETTFPSTTETTQATTTANETTQFSTTESTTSETTTVASSTSS 1928
Query: 555 HT--PTTPDLTSISINPLTP 608
T P+T + TSI+ P
Sbjct: 1929 ETTIPSTTESTSITKETTVP 1948
Score = 32.7 bits (71), Expect = 8.0
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Frame = +3
Query: 195 TVSSTFDHPFSTPVLRSYWHETKSNSVTVQS-LPNVSSIIKGYRDAYLVNLEAVVFPSAP 371
T S T ST + T+S S+T ++ +P+ + + L+ EA PS+
Sbjct: 1915 TTSETTTVASSTSSETTIPSTTESTSITKETTVPSTAETTQASTTTELITSEATTVPSST 1974
Query: 372 SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNPR 551
+ + V + T T+E + +S + + T S T+T +S+
Sbjct: 1975 TSETTVPSTIETTQTSTTIE--TTFPSTTSTTVPLTNETTQFSTTESTTSETTTVASSTS 2032
Query: 552 FHT--PTTPDLTSISINPLTP 608
T P+T + TSI+ P
Sbjct: 2033 SETTIPSTTESTSITKETTVP 2053
>UniRef50_Q1GET5 Cluster: Extensin-like protein; n=4;
Rhodobacteraceae|Rep: Extensin-like protein -
Silicibacter sp. (strain TM1040)
Length = 288
Score = 33.1 bits (72), Expect = 6.1
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 462 ARITIGGLALMHQAT--LPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGL 635
AR T+ GLAL A +P ++A T P TP+ +S P + AP L
Sbjct: 5 ARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPEAARVSAMPTAAILPQSAPAL 64
Query: 636 KPPL 647
+P L
Sbjct: 65 RPQL 68
>UniRef50_A0UP06 Cluster: Cell divisionFtsK/SpoIIIE; n=1; Burkholderia
multivorans ATCC 17616|Rep: Cell divisionFtsK/SpoIIIE -
Burkholderia multivorans ATCC 17616
Length = 1707
Score = 33.1 bits (72), Expect = 6.1
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 219 PFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 398
P P S + S+T + P+ S+ + A ++ PSAP +PV+
Sbjct: 852 PSIAPTAASAMPSGAAASMTTTASPSASAPVSATPSAGTASVTTTASPSAP---VPVSAM 908
Query: 399 LCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAIS--ATSTRSSNPRFHTPTTP 572
TTA G ATP+SA I G A + ++S ++T S T T
Sbjct: 909 PSATTASAMTTGSPSTATPASA-IPSGAAASLTTTASSSVSTPVSATPSGAAASVTTTAS 967
Query: 573 DLTSISINPLT 605
S +P++
Sbjct: 968 PSAPTSASPMS 978
>UniRef50_A7QHY9 Cluster: Chromosome chr17 scaffold_101, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 103
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 438 NVLATPSSARITIGGLALMHQATLPAISATSTRSSNPRFHT-PTTPDLTSI 587
N ++ SS R+T L L+H +L AI++ +T +S+P + P TP T I
Sbjct: 29 NGSSSVSSGRVTSVSLLLIHHKSLHAIASKATAASSPSSSSPPATPTQTPI 79
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 273 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVL 446
V++Q+ ++ + YR A +V +A++ P+ ++ P+TV L W A+ +L
Sbjct: 52 VSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQIL 109
>UniRef50_UPI0000E0EF43 Cluster: putative periplasmic chaperone;
n=1; alpha proteobacterium HTCC2255|Rep: putative
periplasmic chaperone - alpha proteobacterium HTCC2255
Length = 226
Score = 32.7 bits (71), Expect = 8.0
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 240 RSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 419
R YWH + V + + + + + + +A + P + + T D W
Sbjct: 89 RVYWHAQVPDETLVIANGDKVFYVDDFVEQVSIFNQADMVSDNPLMLLTSTDDKVWEQFS 148
Query: 420 VTVEGVNVLATPSSARITIGGLALMH-QATLPAISATSTRSSNPRF 554
VT + + TPSSA+ I GL L+ Q L A + ++ F
Sbjct: 149 VTQQADSFEVTPSSAQGQIQGLTLVFTQGELRAFTLLDNQAQRSEF 194
>UniRef50_UPI0000EBDCE8 Cluster: PREDICTED: similar to glycoprotein
Ib; n=1; Bos taurus|Rep: PREDICTED: similar to
glycoprotein Ib - Bos taurus
Length = 650
Score = 32.7 bits (71), Expect = 8.0
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Frame = +3
Query: 267 NSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVL 446
N + V + S I G RD NL+ + ++PV + ++ T + L
Sbjct: 268 NGMYVYNFLGDSCNIPGDRD----NLDYDEYEDKDEQEVPVVNTVSSLSSHTTHWDLLYL 323
Query: 447 ATPSSARITIGGLALMHQATLPAI---SATSTRSSNPRFHTPTTPDLTSISINPLTP 608
+P+S + L + + T I S TS+++ NP PTTP T S P TP
Sbjct: 324 TSPTSPGSQVSSLPPVKKLTTTPITIDSITSSKTLNPTTEPPTTP-TTPESTTPTTP 379
>UniRef50_A5G353 Cluster: TonB-dependent receptor, plug precursor;
n=1; Acidiphilium cryptum JF-5|Rep: TonB-dependent
receptor, plug precursor - Acidiphilium cryptum (strain
JF-5)
Length = 671
Score = 32.7 bits (71), Expect = 8.0
Identities = 32/113 (28%), Positives = 50/113 (44%)
Frame = +3
Query: 195 TVSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPS 374
TV F P + + SY+H+ SN SLP+ +S + A + +EA + AP+
Sbjct: 480 TVLPAFGIPEAVTLRMSYFHQDISNLFEYTSLPDGTSTEENVARARIHGIEAGI-GFAPA 538
Query: 375 LKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATST 533
+ +D T A G +L P +A G L L + +PA+S T
Sbjct: 539 PWLSGQIDYTRTIARDAATGTALLRRPENA----GSLTLSIR-PIPALSIEPT 586
>UniRef50_Q54RH9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1256
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 372 SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNPR 551
S K P T +T ++ VN + TP+++ I + G+ T ++ ST +
Sbjct: 920 STKDPETTTTTTSTTELDAATVNPIITPATSEIILSGVESKETTTTTTTTSESTDIPSTS 979
Query: 552 FHTPTTPDLTS 584
T T+P+ TS
Sbjct: 980 TITSTSPNNTS 990
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,638,272
Number of Sequences: 1657284
Number of extensions: 11875311
Number of successful extensions: 42825
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 39903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42670
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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