Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021732
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    28   0.23 
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    28   0.23 
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    25   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.7  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    24   3.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   6.5  

>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 273 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 398
           +  + LP+V  ++ G+   +L N  A  FP  P    P+ V+
Sbjct: 247 IIARELPDVDVVVGGHSHTFLYNGTADGFPDDPEDTYPIVVE 288


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 273 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 398
           +  + LP+V  ++ G+   +L N  A  FP  P    P+ V+
Sbjct: 247 IIARELPDVDVVVGGHSHTFLYNGTADGFPDDPEDTYPIVVE 288


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 553 NRGFDDRVDVAEIAGRVA*CIRARPPIVMRAD 458
           N   D  V+    AGR+  CI +RP  V RAD
Sbjct: 82  NAKIDPAVEEQFNAGRLLACISSRPGQVGRAD 113


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 192  GTVSSTFDHPFSTPVLRSYWHETKSNS 272
            G +S TFD PF +  LR  ++ +  +S
Sbjct: 1585 GELSRTFDRPFESVALRFVYNTSVDDS 1611


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 339 NLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPS 458
           NL    F SA  +  P+ V        VT+ GV+VLATP+
Sbjct: 123 NLWLGAFISACFVTYPLFVPGRGLPYGVTIPGVDVLATPT 162


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
 Frame = +2

Query: 422  HS*RSQCAGHPFIRSHYYWRSRPYASSYPPCDLGYINPIIKSPIPYTNHPRLNI---HFH 592
            H      A  P   SH   +++P  S +PP   G  + +I +P P T+H    +   H H
Sbjct: 820  HHLHHHAAQQPPPGSHPGAQTQPQLSQHPPGASGRSSAVI-TP-PSTHHQAAAVAAHHHH 877

Query: 593  QSADAVLEGVRAGVKASVGHQR 658
                A +    A   AS   Q+
Sbjct: 878  LQHHAAMVAAAAAAAASQEQQQ 899


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 213 DHPFSTPVLRSYWHETKSNSVTVQSLPNV 299
           + P+S    +  W  T S S T + +PN+
Sbjct: 851 ERPYSVEAWQREWSTTTSGSWTRRLIPNI 879


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,187
Number of Sequences: 2352
Number of extensions: 12199
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)