Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021732
         (661 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            30   6.4  
BC139779-1|AAI39780.1|  606|Homo sapiens zinc finger protein 652...    30   6.4  
AB023141-1|BAA76768.2|  617|Homo sapiens KIAA0924 protein protein.     30   6.4  
L25597-1|AAA36417.1|  396|Homo sapiens paired box protein protein.     30   8.4  
AL589862-1|CAI17855.1|  396|Homo sapiens paired box gene 2 protein.    30   8.4  
AL138762-4|CAH70951.1|  396|Homo sapiens paired box gene 2 protein.    30   8.4  

>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 27/61 (44%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 408  TTADVTVEGVNVLATPSSARITIGG-LALMHQATLP-AISATSTRSSNPRFHTPTTPDLT 581
            TTA  T       A PSS   T      L  QAT P A S+ +T SS+PR  T T P LT
Sbjct: 1644 TTAATTTATTGSTAIPSSTPGTAPPPKVLTSQATTPTATSSKATSSSSPRTAT-TLPVLT 1702

Query: 582  S 584
            S
Sbjct: 1703 S 1703


>BC139779-1|AAI39780.1|  606|Homo sapiens zinc finger protein 652
           protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 1   VPLVVSAASAIPSLVNAFSSSKPPQTDNP 87
           +PL  S A+ +PS+VN  ++  PP   NP
Sbjct: 506 IPLTTSPATPVPSVVNTATTPTPPINMNP 534


>AB023141-1|BAA76768.2|  617|Homo sapiens KIAA0924 protein protein.
          Length = 617

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 1   VPLVVSAASAIPSLVNAFSSSKPPQTDNP 87
           +PL  S A+ +PS+VN  ++  PP   NP
Sbjct: 517 IPLTTSPATPVPSVVNTATTPTPPINMNP 545


>L25597-1|AAA36417.1|  396|Homo sapiens paired box protein protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
 Frame = +3

Query: 198 VSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLV---NLEAVVFPSA 368
           + S   + +S P L     E KS S++  + P + S + G +   +V   ++ +   P  
Sbjct: 260 IKSEQGNEYSLPALTPGLDEVKS-SLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGY 318

Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNP 548
           P   +P T    + T+ +          PSS+ ++  G  L      P +  T   S   
Sbjct: 319 PP-HVPPTGQGSYPTSTLAGMVPEAAVGPSSSLMSKPGRKLAEVP--PCVQPTGASSPAT 375

Query: 549 RFHTPTTPDLTSISINPLTPY 611
           R  TP+T   T +  +   PY
Sbjct: 376 RTATPSTRPTTRLGDSATPPY 396


>AL589862-1|CAI17855.1|  396|Homo sapiens paired box gene 2 protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
 Frame = +3

Query: 198 VSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLV---NLEAVVFPSA 368
           + S   + +S P L     E KS S++  + P + S + G +   +V   ++ +   P  
Sbjct: 260 IKSEQGNEYSLPALTPGLDEVKS-SLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGY 318

Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNP 548
           P   +P T    + T+ +          PSS+ ++  G  L      P +  T   S   
Sbjct: 319 PP-HVPPTGQGSYPTSTLAGMVPEAAVGPSSSLMSKPGRKLAEVP--PCVQPTGASSPAT 375

Query: 549 RFHTPTTPDLTSISINPLTPY 611
           R  TP+T   T +  +   PY
Sbjct: 376 RTATPSTRPTTRLGDSATPPY 396


>AL138762-4|CAH70951.1|  396|Homo sapiens paired box gene 2 protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
 Frame = +3

Query: 198 VSSTFDHPFSTPVLRSYWHETKSNSVTVQSLPNVSSIIKGYRDAYLV---NLEAVVFPSA 368
           + S   + +S P L     E KS S++  + P + S + G +   +V   ++ +   P  
Sbjct: 260 IKSEQGNEYSLPALTPGLDEVKS-SLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGY 318

Query: 369 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPAISATSTRSSNP 548
           P   +P T    + T+ +          PSS+ ++  G  L      P +  T   S   
Sbjct: 319 PP-HVPPTGQGSYPTSTLAGMVPEAAVGPSSSLMSKPGRKLAEVP--PCVQPTGASSPAT 375

Query: 549 RFHTPTTPDLTSISINPLTPY 611
           R  TP+T   T +  +   PY
Sbjct: 376 RTATPSTRPTTRLGDSATPPY 396


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,929,681
Number of Sequences: 237096
Number of extensions: 1795313
Number of successful extensions: 5106
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5105
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)