Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021731
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.44 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.5  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   9.5  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 238 KQEYMRQQRTSHT*CSSQDLHRFQQQS*EIPQGKSVV*LPRGWPLLREARP 390
           +Q+  +QQR     C  Q   + QQQ  + PQ +    + RG P  R  +P
Sbjct: 200 QQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQP 250


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 350 DSRVVGRYCEK 382
           D R  GRYCEK
Sbjct: 663 DGRYTGRYCEK 673


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +3

Query: 231 WLETRVHEAATNQPHIML*PRSTSIPTTILRDSSGKISGMTPAW 362
           W+ T   EA T          +TS PTT  + +   I+  TP W
Sbjct: 118 WITTTTTEATTTTKFPTT--TTTSAPTTPSQWTDPTITTTTPVW 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,916
Number of Sequences: 2352
Number of extensions: 14306
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)