Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021731
(715 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.9
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 23 3.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 8.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.8
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 238 KQEYMRQQRTSHT*CSSQDLHRFQQQS*EIPQGKSVV*LPRGWPLLREARPALG 399
+Q +QQ+T H + Q + QQQ + Q + + WP+ E + G
Sbjct: 422 QQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEPAASWG 475
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 2.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 410 YERGQCDRELIAVCNDNSLFKTQARYLVRRKDQTSGSRCSLRRILT 547
Y R + +RE + N+NS K + R +D+T R R+I++
Sbjct: 272 YSRSR-EREQKSYKNENSYRKYRETSKERSRDRTERERSKERKIIS 316
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 2.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 410 YERGQCDRELIAVCNDNSLFKTQARYLVRRKDQTSGSRCSLRRILT 547
Y R + +RE + N+NS K + R +D+T R R+I++
Sbjct: 277 YSRSR-EREQKSYKNENSYRKYRETSKERSRDKTERERSKERKIIS 321
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 395 LACVAYERGQCDRE 436
LAC++ GQC RE
Sbjct: 172 LACISSRPGQCGRE 185
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 326 FLRENQWYDSRV 361
FL + QWYD R+
Sbjct: 111 FLLQQQWYDPRL 122
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 326 FLRENQWYDSRV 361
FL + QWYD R+
Sbjct: 111 FLLQQQWYDPRL 122
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 326 FLRENQWYDSRV 361
FL + QWYD R+
Sbjct: 162 FLLQQQWYDPRL 173
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 326 FLRENQWYDSRV 361
FL + QWYD R+
Sbjct: 111 FLLQQQWYDPRL 122
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 8.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 410 YERGQCDRELIAVCNDNSLFKTQARYLVRRKDQTSGSRCSLRRILT 547
Y R + +RE + N+NS K + + R +D+T R +I++
Sbjct: 39 YSRSR-EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIIS 83
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 410 YERGQCDRELIAVCNDNSLFKTQARYLVRRKDQTSGSRCSLRRILT 547
Y R + +RE + N+NS K + + R +D+T R +I++
Sbjct: 39 YSRSR-EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIIS 83
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 410 YERGQCDRELIAVCNDNSLFKTQARYLVRRKDQTSGSRCSLRRILT 547
Y R + +RE + N+NS K + + R +D+T R +I++
Sbjct: 39 YSRSR-EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIIS 83
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 410 YERGQCDRELIAVCNDNSLFKTQARYLVRRKDQTSGSRCSLRRILT 547
Y R + +RE + N+NS K + + R +D+T R +I++
Sbjct: 39 YSRSR-EREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIIS 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,230
Number of Sequences: 438
Number of extensions: 3949
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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