Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021729
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQ52 Cluster: Interleukin enhancer binding factor iso... 106 5e-22
UniRef50_Q12905 Cluster: Interleukin enhancer-binding factor 2; ... 88 2e-16
UniRef50_Q4T1I1 Cluster: Chromosome undetermined SCAF10575, whol... 69 7e-11
UniRef50_Q5BSH0 Cluster: SJCHGC04322 protein; n=1; Schistosoma j... 50 5e-05
UniRef50_Q5XV70 Cluster: Putative uncharacterized protein; n=3; ... 34 2.6
UniRef50_A2ZCX0 Cluster: Putative uncharacterized protein; n=2; ... 34 2.6
UniRef50_UPI0000E24F74 Cluster: PREDICTED: hypothetical protein;... 33 4.5
UniRef50_Q4RTJ4 Cluster: Chromosome 2 SCAF14997, whole genome sh... 33 6.0
UniRef50_UPI00006C0E17 Cluster: PREDICTED: hypothetical protein;... 33 7.9
UniRef50_Q9P3E9 Cluster: Related to protein kinase PAK1; n=2; So... 33 7.9
>UniRef50_Q1HQ52 Cluster: Interleukin enhancer binding factor
isoform 2; n=1; Bombyx mori|Rep: Interleukin enhancer
binding factor isoform 2 - Bombyx mori (Silk moth)
Length = 126
Score = 106 bits (254), Expect = 5e-22
Identities = 49/59 (83%), Positives = 50/59 (84%)
Frame = +2
Query: 242 PRSGRMGRPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSP 418
P G MGRPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKR +P
Sbjct: 13 PGRGGMGRPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRRRTPAHTP 71
>UniRef50_Q12905 Cluster: Interleukin enhancer-binding factor 2;
n=54; Eumetazoa|Rep: Interleukin enhancer-binding factor
2 - Homo sapiens (Human)
Length = 390
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +2
Query: 245 RSGRMGRP--PFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSP 418
R GR G P R + PFD L E AFPR KPAPD++ ++ALLKR+ +L P+
Sbjct: 9 RGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNS 68
Query: 419 TDQAAVLSLVTKLQTVLDNIVVAPGEF 499
+QA++LSLVTK+ V+DN++VAPG F
Sbjct: 69 AEQASILSLVTKINNVIDNLIVAPGTF 95
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +1
Query: 505 LQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 642
+Q+EEVRQVGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 97 VQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>UniRef50_Q4T1I1 Cluster: Chromosome undetermined SCAF10575, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10575, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 406
Score = 69.3 bits (162), Expect = 7e-11
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 21/106 (19%)
Frame = +2
Query: 245 RSGRMGRP--PFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSP 418
R GR G P R + PFD + E AFPR KP PD++ ++ LLKR+ +L P+P
Sbjct: 8 RGGRFGSRGGPVQGYRPFVPHIPFDFYVCEMAFPRVKPPPDETAFSECLLKRNQDLSPTP 67
Query: 419 TDQA-------------------AVLSLVTKLQTVLDNIVVAPGEF 499
+QA ++LSLVTK+ V+DN++VAPG F
Sbjct: 68 AEQAKPQARHLHARGLFFCCLQSSILSLVTKINNVIDNLIVAPGNF 113
Score = 41.1 bits (92), Expect = 0.022
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 532 GSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 642
G ++G G NVAD+VVI+K LPT EAV L NKV
Sbjct: 149 GLLQEGHHDDGHNVADLVVILKILPTLEAVAALGNKV 185
>UniRef50_Q5BSH0 Cluster: SJCHGC04322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04322 protein - Schistosoma
japonicum (Blood fluke)
Length = 241
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +1
Query: 508 QLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 642
QL++VR VGS+K T + G ++D+ + +TLPT EAVE L+N V
Sbjct: 90 QLDQVRSVGSFKLNTWLNGSCISDLTCVFRTLPTLEAVENLANFV 134
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 305 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 484
P D++L EP F P+ D +L Q LL H +L PS Q A+ +L ++ +LDNI+V
Sbjct: 25 PLDIILLEPNF--VIPSNDQKLL-QCLLDHHAKLIPSSDSQYALSNLSNRICEILDNIIV 81
Query: 485 APGEF 499
P F
Sbjct: 82 NPSIF 86
>UniRef50_Q5XV70 Cluster: Putative uncharacterized protein; n=3;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 196
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 379 GPSKEAHRAMSVTYRSSSCFEPRHETADSIRQYCCGSGRICSLQLEEVRQVGS 537
GP R++SV RS E R E + S CC G ++++ VR+ GS
Sbjct: 104 GPYDVPRRSLSVIRRSERASEGRFEFSRSTNSRCCDGGGGTTVKISRVRRKGS 156
>UniRef50_A2ZCX0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 164
Score = 34.3 bits (75), Expect = 2.6
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Frame = +2
Query: 242 PRSGRMG-------RPPFNRPRVLMLRPPFDLLLAEPAFPRCKP--APDDSVLTQALLKR 394
PR GR+G +P +RP++ ++RP LLA A P P +P S Q +
Sbjct: 44 PRRGRLGVHNPPAFKPTPHRPKLPIIRPEHPRLLAGFASPPSPPSLSPWCSGAGQCVQNM 103
Query: 395 HTELCPSPTDQAAVLS 442
EL PSPT ++ L+
Sbjct: 104 QDELPPSPTSASSTLA 119
>UniRef50_UPI0000E24F74 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 223
Score = 33.5 bits (73), Expect = 4.5
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +2
Query: 242 PRSGRMGRPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPT 421
PR ++ RPPFN P ++ PF +L+ FPR A D ++LT+ + + L P
Sbjct: 154 PRCSKLHRPPFNPPTPCLVASPFHPVLS--PFPRFYLA-DSTLLTR--IPPPSLLGGIPR 208
Query: 422 DQAAVLSLVT 451
A VL L+T
Sbjct: 209 PPAPVLVLIT 218
>UniRef50_Q4RTJ4 Cluster: Chromosome 2 SCAF14997, whole genome
shotgun sequence; n=11; Euteleostomi|Rep: Chromosome 2
SCAF14997, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 520
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 227 WWTRYPRSGRMGRPPFNRPRVLMLR-PPFDLLLAEPAFPRC 346
WWT S R GR P P + +L PP LL PA RC
Sbjct: 416 WWTAVDVSRRGGRGPRAPPGLRLLAGPPLPALLLPPAATRC 456
>UniRef50_UPI00006C0E17 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 154
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 338 PRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLS 442
P+C+P+P Q L H PSP AA+LS
Sbjct: 116 PKCRPSPSSWPRNQRLHPAHVTAAPSPNPNAALLS 150
>UniRef50_Q9P3E9 Cluster: Related to protein kinase PAK1; n=2;
Sordariales|Rep: Related to protein kinase PAK1 -
Neurospora crassa
Length = 1246
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 296 LRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVT 451
LR + AEPA C P+P D++ ++A ++ T + S T AA+ S +T
Sbjct: 1001 LRGNHETSSAEPASVPCPPSPGDNMFSRAQSRQGTIVWSSTTSMAALTSPLT 1052
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,671,217
Number of Sequences: 1657284
Number of extensions: 12009966
Number of successful extensions: 27512
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27502
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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