Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021729
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 62  RLIQFEHYISSCVTIIKEKLEKTQLLCH 145
           RLI F+       T+I  K  K +LLC+
Sbjct: 109 RLIHFDTKCQENSTVIDYKRHKKRLLCY 136


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 62  RLIQFEHYISSCVTIIKEKLEKTQLLCH 145
           RLI F+       T+I  K  K +LLC+
Sbjct: 127 RLIHFDTKCQENSTVIDYKRHKKRLLCY 154


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory
          receptor candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 37 SNHNKFPKWQIC 2
          S +N+ P+W IC
Sbjct: 32 STNNEVPRWYIC 43


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 495 NLQPATRRSAASWVLQEGDNDGREE 569
           NLQ    RS A W +   + D RE+
Sbjct: 352 NLQSCPTRSHAVWEMVLNELDRRED 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,335
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)