Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021729
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...    91   9e-19
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...    91   9e-19
BT023103-1|AAY55519.1|  424|Drosophila melanogaster IP10877p pro...    30   2.4  
BT023051-1|AAY55467.1|  573|Drosophila melanogaster IP10977p pro...    30   2.4  
BT023015-1|AAY55431.1|  577|Drosophila melanogaster IP11077p pro...    30   2.4  
AE014297-3363|AAN13955.2|  551|Drosophila melanogaster CG31414-P...    30   2.4  

>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score = 91.5 bits (217), Expect = 9e-19
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +2

Query: 263 RPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAV 436
           RPPF +    + R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+
Sbjct: 17  RPPFKK--TFVPRHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAI 74

Query: 437 LSLVTKLQTVLDNIVVAPGEFAACN*KKCGKLGPTRRG 550
            +LVTK+Q VLDN+VVAPG+   C  ++  ++G  ++G
Sbjct: 75  GNLVTKVQAVLDNLVVAPGDLTTCQLEEVRQVGSFKKG 112



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +1

Query: 490 GRICSLQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 642
           G + + QLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV
Sbjct: 93  GDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKV 143


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score = 91.5 bits (217), Expect = 9e-19
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +2

Query: 263 RPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAV 436
           RPPF +    + R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+
Sbjct: 17  RPPFKK--TFVPRHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAI 74

Query: 437 LSLVTKLQTVLDNIVVAPGEFAACN*KKCGKLGPTRRG 550
            +LVTK+Q VLDN+VVAPG+   C  ++  ++G  ++G
Sbjct: 75  GNLVTKVQAVLDNLVVAPGDLTTCQLEEVRQVGSFKKG 112



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +1

Query: 490 GRICSLQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 642
           G + + QLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV
Sbjct: 93  GDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKV 143


>BT023103-1|AAY55519.1|  424|Drosophila melanogaster IP10877p
           protein.
          Length = 424

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 LWLRENLQPATRRSAASWVLQEGDNDGR 563
           +WL +NL P  R SA S VL  G++D R
Sbjct: 181 IWLNDNLGPTIRNSAESKVLIFGNDDQR 208


>BT023051-1|AAY55467.1|  573|Drosophila melanogaster IP10977p
           protein.
          Length = 573

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 LWLRENLQPATRRSAASWVLQEGDNDGR 563
           +WL +NL P  R SA S VL  G++D R
Sbjct: 330 IWLNDNLGPTIRNSAESKVLIFGNDDQR 357


>BT023015-1|AAY55431.1|  577|Drosophila melanogaster IP11077p
           protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 LWLRENLQPATRRSAASWVLQEGDNDGR 563
           +WL +NL P  R SA S VL  G++D R
Sbjct: 334 IWLNDNLGPTIRNSAESKVLIFGNDDQR 361


>AE014297-3363|AAN13955.2|  551|Drosophila melanogaster CG31414-PA
           protein.
          Length = 551

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 LWLRENLQPATRRSAASWVLQEGDNDGR 563
           +WL +NL P  R SA S VL  G++D R
Sbjct: 308 IWLNDNLGPTIRNSAESKVLIFGNDDQR 335


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,034,822
Number of Sequences: 53049
Number of extensions: 579014
Number of successful extensions: 1296
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)