Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021728
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.66 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 55  FENRTFDCYQLSFETQKSMS*RHIRKSSLLVNIGI 159
           F N+T+D + +SFE    +  +H+   +  V +G+
Sbjct: 571 FANKTYDFHNMSFENDFIIQPKHLLSIARQVALGM 605


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 65  RFSKETLKNLTDYNF 21
           RFS E  KNLT Y +
Sbjct: 413 RFSDENKKNLTPYTY 427


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 429 SVYIFKAFVLDVDRW 385
           +V IFK+   DVD+W
Sbjct: 95  TVTIFKSAFWDVDKW 109


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +2

Query: 566 TSRKYGNMGELKDIKVGGSEVSLELPKDGSPVESSRKRKLRIKKPSVHLCRKITF-VTIS 742
           T   YG++G L    +GG + S       +  + + +R     KP       IT  +  S
Sbjct: 97  TMNSYGSVGTLGRGDLGGGDTSPNSALQRARADKTYRRSYTHAKPPYSYISLITMAIQNS 156

Query: 743 TFTMLT 760
              MLT
Sbjct: 157 PQKMLT 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,688
Number of Sequences: 336
Number of extensions: 3800
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)