Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021727
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    58   3e-08
BC047726-1|AAH47726.1|  273|Homo sapiens OAF homolog (Drosophila...    31   2.8  
AY459296-1|AAR23238.1|  273|Homo sapiens NS5ATP13TP2 protein.          31   2.8  
BC114621-1|AAI14622.1|  977|Homo sapiens SLIT and NTRK-like fami...    31   3.7  
AB020655-1|BAA74871.2|  988|Homo sapiens KIAA0848 protein protein.     31   3.7  

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = +1

Query: 130 MVNYAWSGRSQGKP*WRTVATLTCKSIVGTGYRG 231
           MVNYAW+GRSQ K  WR+VA LTCKS+V  GYRG
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRG 34


>BC047726-1|AAH47726.1|  273|Homo sapiens OAF homolog (Drosophila)
           protein.
          Length = 273

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = -3

Query: 600 CTLLSGFRLPWPPSC---CH--ERPTPFMVSHERFLAP*HYVWFIPQRQFCL 460
           C    G  L W P     CH  +RPTP+            + +++PQRQ CL
Sbjct: 214 CVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265


>AY459296-1|AAR23238.1|  273|Homo sapiens NS5ATP13TP2 protein.
          Length = 273

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = -3

Query: 600 CTLLSGFRLPWPPSC---CH--ERPTPFMVSHERFLAP*HYVWFIPQRQFCL 460
           C    G  L W P     CH  +RPTP+            + +++PQRQ CL
Sbjct: 214 CVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265


>BC114621-1|AAI14622.1|  977|Homo sapiens SLIT and NTRK-like family,
           member 3 protein.
          Length = 977

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = -1

Query: 605 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVFWRLNTTFGSSHSASSAYQNWPTWHRHQI 426
           +V     ++ FH H   +   ++   CP+     +  + G  HS+SS    WPT     +
Sbjct: 255 LVGDITCETPFHFHGKDLREIRKTELCPLLSDSEVEASLGIPHSSSSKENAWPTKPSSML 314

Query: 425 SGFIVRVSRSSHPFK 381
           S   V  + SS  +K
Sbjct: 315 SS--VHFTASSVEYK 327


>AB020655-1|BAA74871.2|  988|Homo sapiens KIAA0848 protein protein.
          Length = 988

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = -1

Query: 605 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVFWRLNTTFGSSHSASSAYQNWPTWHRHQI 426
           +V     ++ FH H   +   ++   CP+     +  + G  HS+SS    WPT     +
Sbjct: 266 LVGDITCETPFHFHGKDLREIRKTELCPLLSDSEVEASLGIPHSSSSKENAWPTKPSSML 325

Query: 425 SGFIVRVSRSSHPFK 381
           S   V  + SS  +K
Sbjct: 326 SS--VHFTASSVEYK 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,852,178
Number of Sequences: 237096
Number of extensions: 2456843
Number of successful extensions: 8851
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8851
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)