Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021726
         (702 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0P180 Cluster: Putative uncharacterized protein; n=1; ...    37   0.55 
UniRef50_A6R6M6 Cluster: Predicted protein; n=1; Ajellomyces cap...    35   1.7  
UniRef50_Q2SSX3 Cluster: Membrane protein, putative; n=2; Mycopl...    34   2.9  
UniRef50_Q94HC2 Cluster: Putative uncharacterized protein OSJNBb...    34   2.9  
UniRef50_Q9FVZ2 Cluster: Putative uncharacterized protein OSJNBb...    34   3.9  
UniRef50_Q24HY9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_A5K6X9 Cluster: Protein kinase, putative; n=6; Plasmodi...    33   5.1  
UniRef50_Q4FUJ7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  
UniRef50_Q6C1T0 Cluster: Similar to tr|Q9H841 Homo sapiens Putat...    33   9.0  
UniRef50_Q4PGS3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q0P180 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 167

 Score = 36.7 bits (81), Expect = 0.55
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 293 WPSDGDSGA---TAMYQKHCTVWGRARNGRWRSGAIERCTGDDGATATRKRREQTTLVSS 123
           W   G +GA   T+  Q+H T  G A +  WR+G +       G +A  +RRE TT+  S
Sbjct: 47  WARRGRAGAETATSEPQRHATRGGVAASSEWRTGGVVESRTAAGRSA-GERREPTTVAGS 105

Query: 122 LRG 114
            RG
Sbjct: 106 PRG 108


>UniRef50_A6R6M6 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 852

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 593 IYIVERPSKKTKKLKVNISIKH--IILYKLYKLCFDASNEHYANSKFVDLQEER 438
           +Y      +   K ++NI+ KH  +I YK    C +  NE+  +S+ +D+Q+ R
Sbjct: 753 VYGCSSSGENATKARINITTKHSYVIHYKYLWCCVECGNEYGRHSRSIDVQKSR 806


>UniRef50_Q2SSX3 Cluster: Membrane protein, putative; n=2;
           Mycoplasma|Rep: Membrane protein, putative - Mycoplasma
           capricolum subsp. capricolum (strain California kid /
           ATCC27343 / NCTC 10154)
          Length = 235

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = -2

Query: 701 KR*SFKMITYKKDKL*NIYFVKLPFSYKHGCLLFNFIYIVERPSKKTKKLKVNISIKHII 522
           K+  F +   K + L N+Y     F+ K   LL NFI I++  +   K    NIS  +  
Sbjct: 14  KKKKFFLDFLKNNNLENVYLKNHDFNKKSNILLNNFIIILKIHNLNYKHYWANISFMNFC 73

Query: 521 LYKLY 507
           +Y LY
Sbjct: 74  IYYLY 78


>UniRef50_Q94HC2 Cluster: Putative uncharacterized protein
           OSJNBb0061I18.13; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0061I18.13 - Oryza sativa subsp. japonica (Rice)
          Length = 202

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 172 PSSPVHRSIAPLRHRPFRARPHTVQCF*YIAVAPLSPSLGHRKPR 306
           P SP HR++A +     RA P T     + A AP  P  GH  PR
Sbjct: 82  PRSPPHRAVAAVGFARSRATPSTPPSSRFAAGAPFPPCDGHSGPR 126


>UniRef50_Q9FVZ2 Cluster: Putative uncharacterized protein
           OSJNBb0073N24.8; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0073N24.8 - Oryza sativa subsp. japonica (Rice)
          Length = 146

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = -2

Query: 305 RGLRW--PSDGD--SGATAMYQKHCTVWGRARNGRWRSGAIERCTGDDGATATRKRRE 144
           RGLRW  PS GD  + A A   +   + GR R  RW  G +           TR+RRE
Sbjct: 52  RGLRWTAPSVGDDAAAAAAAEAEASGILGRGRRRRWGIGRVAPFADATRRDETRRRRE 109


>UniRef50_Q24HY9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 517

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = -2

Query: 572 SKKTKKLKVNISI-KHIILYKLYKLCFDASNEHYANSKFVDLQEERLNEK 426
           SKK  K K N  + K+I+L K+Y+   +  N++    +++D+  E++NEK
Sbjct: 180 SKKQNKCKTNKKLAKYILLIKVYE---EQINQYKLREEYIDMLVEKINEK 226


>UniRef50_A5K6X9 Cluster: Protein kinase, putative; n=6;
           Plasmodium|Rep: Protein kinase, putative - Plasmodium
           vivax
          Length = 955

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -2

Query: 569 KKTKKLKVNISIKHIILYKLYKLCFDASNEHYANSKFVDLQEERLNEK 426
           K+ KK+K N  + H+I + L KLC +  N  Y     +D  +  ++ K
Sbjct: 240 KRKKKVKSNQVVLHLIEFLLNKLCEENLNYKYGREHMLDFHDSLMHSK 287


>UniRef50_Q4FUJ7 Cluster: Putative uncharacterized protein; n=1;
           Psychrobacter arcticus|Rep: Putative uncharacterized
           protein - Psychrobacter arcticum
          Length = 127

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
 Frame = -2

Query: 662 KL*NIYFVKLPFSYKHGCLL-------FNFIYIVERPSKKTKKLKV-NISIKHIILYKLY 507
           KL NIY    P   KHG  L         + YIVE   +  KK  + N+ IKH  L    
Sbjct: 18  KLLNIYLNHFPSHEKHGLALKIRQTAYDMYDYIVEAQKRYHKKTTLTNLDIKHEQLRMQV 77

Query: 506 KLCFDASNEHYANSKFVDLQEERLNEK 426
           +L F+ S  ++ + K   +  ++LN K
Sbjct: 78  RLAFELS--YFGHPKTEKMSVQKLNAK 102


>UniRef50_Q6C1T0 Cluster: Similar to tr|Q9H841 Homo sapiens Putative
           uncharacterized protein FLJ13955; n=1; Yarrowia
           lipolytica|Rep: Similar to tr|Q9H841 Homo sapiens
           Putative uncharacterized protein FLJ13955 - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 395

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +2

Query: 149 VASASPSPHHRPYIARSPRSAIARFVPVPILCNAFDTSPSRRCRHRS 289
           +AS++P+PHH  +  R  RSA   F P+ +   +F    +R  R +S
Sbjct: 340 LASSAPAPHHHHHALRRTRSAHLAFDPIALGGISFFVDSAREWRSQS 386


>UniRef50_Q4PGS3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 307

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +2

Query: 149 VASASPSPHHRPYIARSPRSAIARFVPVPILCNAFDTSPSRR 274
           +A  S + HH  +IA +P  ++ R V   +  NAFDT+PS R
Sbjct: 1   MAYISQTSHH--HIAAAPLESLCRLVLCALYTNAFDTTPSIR 40


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,848,219
Number of Sequences: 1657284
Number of extensions: 10917126
Number of successful extensions: 30787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30771
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)