Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021726
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.60 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 374 VTQKKHKYICNNKDFINFFHLNAPPVNLRIWS 469
           + +K +K +    D    FHL    VNL  W+
Sbjct: 379 ILEKLYKDLLELSDETELFHLGGDEVNLECWA 410


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 30  EILNSLLNYKFLIINFH 80
           ++ NSL  Y+ L+I FH
Sbjct: 365 DLFNSLFGYQTLLITFH 381


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 611 CLLFNFIYIVERPSKKTKKLKVN 543
           CLL  F Y     S +TK L+ N
Sbjct: 9   CLLLMFSYTDNVSSTRTKYLRTN 31


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 138 YFGFILARVHSVVFSYYF 85
           Y  FI+  VH ++ +YYF
Sbjct: 86  YCPFIIFTVHFLLCTYYF 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,922
Number of Sequences: 336
Number of extensions: 2978
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)