Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021725
(634 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 25 0.40
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 23 1.6
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 23 2.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 3.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 3.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 3.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 3.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 3.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 3.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 3.7
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.5
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 25.4 bits (53), Expect = 0.40
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 370 CERIRLCLEHPSQTAPVQSGCWSYW 444
C++ LC + P+ P+ C YW
Sbjct: 150 CQKHPLCNDDPNGNVPLGKSCNRYW 174
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -3
Query: 146 HHWP--LTVILKVYSKDLSVELYG 81
H W ++LK+ SKDLS YG
Sbjct: 93 HKWSTLFEILLKLESKDLSRTFYG 116
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 555 VGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPT--PAL 421
+ +H+ SR + + + P L +W+ S P+P AP+ PAL
Sbjct: 38 MASHLMAASRLSLPTNPAFFHPGLLPL-AWQANSPPSPPAPSELPAL 83
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 165 NLSSPASSTSSTSSTEKAGTNNNNSKSG 192
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 165 NLSSPASSTSSTSSTEKAGTNNNNSKSG 192
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 165 NLSSPASSTSSTSSTEKAGTNNNNSKSG 192
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 165 NLSSPASSTSSTSSTEKAGTNNNNSKSG 192
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 121 NLSSPASSTSSTSSTEKAGTNNNNSKSG 148
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 165 NLSSPASSTSSTSSTEKAGTNNNNSKSG 192
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 502 DLEAVANTRRFVADKEFAGTSSSNTRSG 419
+L + A++ + E AGT+++N++SG
Sbjct: 165 NLSSPASSTSSTSSTEKAGTNNNNSKSG 192
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 459 KSSPAPVAPTPALDRCSLRRMLQAETNPLAATSRRLTSIRSV 334
K SP AP+P+ SL + +NP ++ +TS SV
Sbjct: 68 KKSPQG-APSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSV 108
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,047
Number of Sequences: 336
Number of extensions: 2528
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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