Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021725
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    29   0.12 
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.1  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 333 RPNGSKSASDWLLREDSSLLGASFSNCTGP--ERVLELLVPANSLSATNLRVLATASRSP 506
           +P G +S  D L+ +DSS      SN      +RV      +  LS  ++R + T  RS 
Sbjct: 380 KPRGRQSPDDGLIHDDSSFSNGDASNRNSGRFQRVGTTRSTSTKLSNCSMRTIRTTVRST 439

Query: 507 *SP 515
            +P
Sbjct: 440 RAP 442


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 16/62 (25%), Positives = 23/62 (37%)
 Frame = -2

Query: 516 RDSTGTWRPSLTRADSWRTKSSPAPVAPTPALDRCSLRRMLQAETNPLAATSRRLTSIRS 337
           R +T T RP+ T    W T ++      T    +        A T P   T   +T+   
Sbjct: 102 RPTTTTLRPTTTTTTDWITTTTTEATTTT----KFPTTTTTSAPTTPSQWTDPTITTTTP 157

Query: 336 VW 331
           VW
Sbjct: 158 VW 159


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +2

Query: 335 TERIEVSLRLVAARGFVSAWSILLKLHRSRAGV------GATGAGELFVRHESARVSDGL 496
           TE +EV ++L   R    +  +L K ++ R G+      GA+GA    +R  S  VS  +
Sbjct: 471 TEPVEVLMQLFRPRDRCQSEPVLFK-YKPRPGMMVVPGAGASGASRKRLRISSGNVSSEI 529

Query: 497 QVPVES 514
              +++
Sbjct: 530 PTVIQN 535


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 425  AGVGATGAGELFVRHESARVSDGLQVPVESRSACRLG 535
            +G GATG+G+   +H    +S G   P   +S   +G
Sbjct: 2040 SGDGATGSGDNGSQHGGGSISGGGGTPGGGKSKGIIG 2076


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,950
Number of Sequences: 2352
Number of extensions: 10507
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)