Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021725
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51432-1|AAC15912.1| 536|Homo sapiens nuclear protein Skip prot... 56 1e-07
U43960-1|AAB48857.1| 255|Homo sapiens unknown protein. 56 1e-07
CR457433-1|CAG33714.1| 536|Homo sapiens SNW1 protein. 56 1e-07
BT020061-1|AAV38864.1| 536|Homo sapiens SKI-interacting protein... 56 1e-07
BT020060-1|AAV38863.1| 536|Homo sapiens SKI-interacting protein... 56 1e-07
BC108903-1|AAI08904.1| 536|Homo sapiens SNW domain containing 1... 56 1e-07
BC046105-1|AAH46105.2| 531|Homo sapiens SNW1 protein protein. 56 1e-07
BC040112-1|AAH40112.1| 531|Homo sapiens SNW1 protein protein. 56 1e-07
AF045184-1|AAC31697.1| 536|Homo sapiens nuclear receptor coacti... 56 1e-07
AC008372-1|AAF23325.1| 536|Homo sapiens nuclear receptor coacti... 56 1e-07
AC008044-2|AAF01479.1| 287|Homo sapiens protein ( Homo sapiens ... 56 1e-07
BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open read... 31 4.5
AY557346-1|AAS67920.1| 273|Homo sapiens ankyrin repeat and SOCS... 31 4.5
AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open read... 31 4.5
AK095517-1|BAC04565.1| 652|Homo sapiens protein ( Homo sapiens ... 31 4.5
AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens ... 31 4.5
AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein. 31 4.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 7.8
BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 30 7.8
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 7.8
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 7.8
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 7.8
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 7.8
AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein pro... 30 7.8
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 7.8
>U51432-1|AAC15912.1| 536|Homo sapiens nuclear protein Skip
protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>U43960-1|AAB48857.1| 255|Homo sapiens unknown protein.
Length = 255
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 134 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 179
Score = 45.6 bits (103), Expect = 1e-04
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 177 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 218
Query: 337 GLDRFLSEAKR 305
LD+FL EAK+
Sbjct: 219 XLDKFLEEAKQ 229
>CR457433-1|CAG33714.1| 536|Homo sapiens SNW1 protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>BT020061-1|AAV38864.1| 536|Homo sapiens SKI-interacting protein
protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>BT020060-1|AAV38863.1| 536|Homo sapiens SKI-interacting protein
protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>BC108903-1|AAI08904.1| 536|Homo sapiens SNW domain containing 1
protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>BC046105-1|AAH46105.2| 531|Homo sapiens SNW1 protein protein.
Length = 531
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 410 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 455
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 453 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 494
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 495 GLDKFLEEAKQ 505
>BC040112-1|AAH40112.1| 531|Homo sapiens SNW1 protein protein.
Length = 531
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 410 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 455
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 453 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 494
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 495 GLDKFLEEAKQ 505
>AF045184-1|AAC31697.1| 536|Homo sapiens nuclear receptor
coactivator NCoA-62 protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>AC008372-1|AAF23325.1| 536|Homo sapiens nuclear receptor
coactivator NCoA-62 protein.
Length = 536
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 415 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 460
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 458 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 499
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 500 GLDKFLEEAKQ 510
>AC008044-2|AAF01479.1| 287|Homo sapiens protein ( Homo sapiens
chromosome 14 BAC containing genes for ABH and nuclear
receptor coactivator NCoA-62, complete sequence. ).
Length = 287
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = -2
Query: 633 SKGIDSGY--GEDDAYNVYDKPWRNQDNVGAHIYRPSRHADRDSTG 502
SKG+DSG+ GED+ YNVYD+ WR ++ IYRPS++ D+D G
Sbjct: 166 SKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG 211
Score = 48.4 bits (110), Expect = 2e-05
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -1
Query: 511 LYGD-LEAVANTRRFVADKEFAGTS-SSNTRSGPVQFEKDAPSRDESSRSNQSEADFDPF 338
+YGD LEA T RFV DKEF+G+ R GPVQFE+ DPF
Sbjct: 209 MYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE------------------DPF 250
Query: 337 GLDRFLSEAKR 305
GLD+FL EAK+
Sbjct: 251 GLDKFLEEAKQ 261
>BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -2
Query: 579 KPWRNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTPALDRCS 409
+PW++ + + ++P++ A S G W+P SP P PTP++ S
Sbjct: 321 RPWKSNPSASSGPWKPAKPAPSVSPGPWKPI--------PSVSPGPWKPTPSVSSAS 369
>AY557346-1|AAS67920.1| 273|Homo sapiens ankyrin repeat and SOCS
box-containing protein 16 isoform protein.
Length = 273
Score = 30.7 bits (66), Expect = 4.5
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +3
Query: 516 GRRAGWADRCARRRCPGSATACRTRCTRHPLRSRCRFP 629
GRR A +C RRCP S R R TR P RS CR P
Sbjct: 27 GRRRAAAQQCRSRRCPSSP---RARLTR-PHRS-CRDP 59
>AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -2
Query: 579 KPWRNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTPALDRCS 409
+PW++ + + ++P++ A S G W+P SP P PTP++ S
Sbjct: 321 RPWKSNPSASSGPWKPAKPAPSVSPGPWKPI--------PSVSPGPWKPTPSVSSAS 369
>AK095517-1|BAC04565.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ38198 fis, clone FCBBF1000374. ).
Length = 652
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 288 LDDLSALFASLKNRSRPNGSKSASDWLLREDSSLLGASFSNCTGPERVLE 437
LDDL++ F+SL N PNG+ R+D + + A +C R+LE
Sbjct: 499 LDDLASTFSSLSNEEDPNGTPR------RQDCAEMTAPSPSCAFCRRLLE 542
>AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ90413 fis, clone NT2RP3000063, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 740
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -2
Query: 579 KPWRNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTPALDRCS 409
+PW++ + + ++P++ A S G W+P SP P PTP++ S
Sbjct: 249 RPWKSNPSASSGPWKPAKPAPSVSPGPWKPI--------PSVSPGPWKPTPSVSSAS 297
>AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein.
Length = 821
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -2
Query: 579 KPWRNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTPALDRCS 409
+PW++ + + ++P++ A S G W+P SP P PTP++ S
Sbjct: 330 RPWKSNPSASSGPWKPAKPAPSVSPGPWKPI--------PSVSPGPWKPTPSVSSAS 378
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 338 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 385
>BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein.
Length = 311
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 242 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 289
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 338 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 385
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 338 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 385
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 303 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 350
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 128 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 175
>AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein
protein.
Length = 229
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 142 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 189
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 570 RNQDNVGAHIYRPSRHADRDSTGTWRPSLTRADSWRTKSSPAPVAPTP 427
+++D RPS +R STG P+ T + R SP P+A TP
Sbjct: 386 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTP 433
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,854,661
Number of Sequences: 237096
Number of extensions: 1538841
Number of successful extensions: 5160
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5136
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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